Gene
RNA
| Item | Value |
|---|---|
| gene id | G486492 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 23350697 ~ 23351177 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: dentin sialophosphoprotein-like, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU552918 | True | 481 | lncRNA | 0.44 | 1 | 23350697 | 23351177 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525522 | LOC106585477 | coding | upstream | 18282 | 22832330 ~ 23332415 (+) |
| LOC118964855 | LOC106585477 | coding | upstream | 30576 | 23312041 ~ 23320121 (+) |
| LOC110525581 | LOC106585477 | coding | upstream | 42406 | 23305581 ~ 23313220 (+) |
| LOC110525520 | LOC106585478 | coding | upstream | 124911 | 23181353 ~ 23227167 (+) |
| LOC110525518 | LOC106585474 | coding | upstream | 153183 | 23079630 ~ 23197514 (+) |
| LOC110525161 | bicdl1 | coding | downstream | 7900 | 23359077 ~ 23392808 (+) |
| LOC110525542 | NA | coding | downstream | 209721 | 23560898 ~ 23570652 (+) |
| asgrl1 | LOC106585488 | coding | downstream | 245035 | 23596212 ~ 23606381 (+) |
| LOC110525547 | LOC106585491 | coding | downstream | 257496 | 23608673 ~ 23609827 (+) |
| LOC110525549 | hnf1a | coding | downstream | 326297 | 23677474 ~ 23703291 (+) |
| G486411 | NA | non-coding | upstream | 90132 | 23251570 ~ 23260565 (+) |
| G486312 | LOC107567955 | non-coding | upstream | 286683 | 23062736 ~ 23064014 (+) |
| G486313 | LOC105902522 | non-coding | upstream | 288345 | 23060989 ~ 23062352 (+) |
| G486493 | NA | non-coding | downstream | 194 | 23351371 ~ 23351732 (+) |
| G486497 | NA | non-coding | downstream | 5690 | 23356867 ~ 23357387 (+) |
| G486499 | NA | non-coding | downstream | 13357 | 23364534 ~ 23364761 (+) |
| G486504 | NA | non-coding | downstream | 32375 | 23383552 ~ 23383766 (+) |
| G486127 | NA | other | upstream | 676245 | 22674242 ~ 22674452 (+) |
| G485780 | NA | other | upstream | 906078 | 22441316 ~ 22444619 (+) |
| G484726 | NA | other | upstream | 1796600 | 21553732 ~ 21554097 (+) |
| G484674 | NA | other | upstream | 1883792 | 21464139 ~ 21466905 (+) |
| G487078 | LOC106585486 | other | downstream | 177563 | 23528740 ~ 23531799 (+) |
| G487146 | LOC106585492 | other | downstream | 301943 | 23653120 ~ 23667927 (+) |
| LOC110525563 | LOC106585507 | other | downstream | 560644 | 23911741 ~ 23914297 (+) |
| G488049 | NA | other | downstream | 1228784 | 24579961 ~ 24586313 (+) |
| G488078 | NA | other | downstream | 1279792 | 24630969 ~ 24631396 (+) |
