G486493


Basic Information

Item Value
gene id G486493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23351371 ~ 23351732 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU552919
caactttgttcacctctcctacaccaacaactttgttcacctctcctacagcaacaactttgttcacctctcctacagcaacaactttgttcacctctcctacagcaacaactttgttcacctctcctacagcaacaactttgttcacctctcctacagcaacaactttgttcacctctcctacaccaacaactttgttcacctctcctacagcaacaactttgttcacctctcctaaagcaacaactttgttcacctctcctacaccaacaactttgttcacctctcctacaccaacaactttgttcacctctcctacagcaacaactttgttcacctctcctacaccaacaactttgttc

Function

NR:

description
PREDICTED: glutamate-rich protein 3

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU552919 True 362 lncRNA 0.44 1 23351371 23351732

Neighbor

gene id symbol gene type direction distance location
LOC110525522 LOC106585477 coding upstream 18956 22832330 ~ 23332415 (+)
LOC118964855 LOC106585477 coding upstream 31250 23312041 ~ 23320121 (+)
LOC110525581 LOC106585477 coding upstream 43080 23305581 ~ 23313220 (+)
LOC110525520 LOC106585478 coding upstream 125585 23181353 ~ 23227167 (+)
LOC110525518 LOC106585474 coding upstream 153857 23079630 ~ 23197514 (+)
LOC110525161 bicdl1 coding downstream 7345 23359077 ~ 23392808 (+)
LOC110525542 NA coding downstream 209166 23560898 ~ 23570652 (+)
asgrl1 LOC106585488 coding downstream 244480 23596212 ~ 23606381 (+)
LOC110525547 LOC106585491 coding downstream 256941 23608673 ~ 23609827 (+)
LOC110525549 hnf1a coding downstream 325742 23677474 ~ 23703291 (+)
G486492 NA non-coding upstream 194 23350697 ~ 23351177 (+)
G486411 NA non-coding upstream 90806 23251570 ~ 23260565 (+)
G486312 LOC107567955 non-coding upstream 287357 23062736 ~ 23064014 (+)
G486497 NA non-coding downstream 5135 23356867 ~ 23357387 (+)
G486499 NA non-coding downstream 12802 23364534 ~ 23364761 (+)
G486504 NA non-coding downstream 31820 23383552 ~ 23383766 (+)
G486481 NA non-coding downstream 41256 23392988 ~ 23393662 (+)
G486127 NA other upstream 676919 22674242 ~ 22674452 (+)
G485780 NA other upstream 906752 22441316 ~ 22444619 (+)
G484726 NA other upstream 1797274 21553732 ~ 21554097 (+)
G484674 NA other upstream 1884466 21464139 ~ 21466905 (+)
G487078 LOC106585486 other downstream 177008 23528740 ~ 23531799 (+)
G487146 LOC106585492 other downstream 301388 23653120 ~ 23667927 (+)
LOC110525563 LOC106585507 other downstream 560089 23911741 ~ 23914297 (+)
G488049 NA other downstream 1228229 24579961 ~ 24586313 (+)
G488078 NA other downstream 1279237 24630969 ~ 24631396 (+)

Expression


Co-expression Network