G486527


Basic Information

Item Value
gene id G486527
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23451394 ~ 23470618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU552956
atttttgggggGAGTGGTGGGAGTCCAGGGAGTCTGTCACAGAGCCATTCAGAGCCTCAGCCGAGGGAGGGGGTGGCACCGGGGGAGGGACTGACACATCCTGGTAGGAGCTCCCTCCAGTGGGGAAGGAGTAGGGGGTCTCCTCAGACAGGAACACAGGATGCTTGGAGATGTGGGACGTCGTGGATTCCAGGTCCGCCAACAAAGCg

Function

NR:

description
paxillin-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU552956 True 209 lncRNA 0.61 2 23451394 23470618

Neighbor

gene id symbol gene type direction distance location
LOC110525161 bicdl1 coding upstream 58586 23359077 ~ 23392808 (+)
LOC118964855 LOC106585477 coding upstream 131273 23312041 ~ 23320121 (+)
LOC110525581 LOC106585477 coding upstream 143103 23305581 ~ 23313220 (+)
LOC110525520 LOC106585478 coding upstream 225608 23181353 ~ 23227167 (+)
LOC110525518 LOC106585474 coding upstream 253880 23079630 ~ 23197514 (+)
LOC110525542 NA coding downstream 90280 23560898 ~ 23570652 (+)
asgrl1 LOC106585488 coding downstream 125594 23596212 ~ 23606381 (+)
LOC110525547 LOC106585491 coding downstream 138055 23608673 ~ 23609827 (+)
LOC110525549 hnf1a coding downstream 206856 23677474 ~ 23703291 (+)
ggt5a LOC106585500 coding downstream 320826 23791444 ~ 23801151 (+)
G486525 NA non-coding upstream 4147 23447037 ~ 23447247 (+)
G486518 LOC106585483 non-coding upstream 15419 23435300 ~ 23435975 (+)
G486472 NA non-coding upstream 39624 23411076 ~ 23411770 (+)
G486468 NA non-coding upstream 52237 23397038 ~ 23399157 (+)
G486469 NA non-coding upstream 54674 23396371 ~ 23396720 (+)
G487069 kiaa1671 non-coding downstream 42217 23512835 ~ 23515113 (+)
G487091 NA non-coding downstream 93515 23564133 ~ 23564830 (+)
G487104 NA non-coding downstream 103767 23574385 ~ 23574649 (+)
G487106 NA non-coding downstream 104833 23575451 ~ 23575710 (+)
G487109 NA non-coding downstream 108406 23579024 ~ 23579233 (+)
G486127 NA other upstream 776942 22674242 ~ 22674452 (+)
G485780 NA other upstream 1006775 22441316 ~ 22444619 (+)
G484726 NA other upstream 1897297 21553732 ~ 21554097 (+)
G484674 NA other upstream 1984489 21464139 ~ 21466905 (+)
G487078 LOC106585486 other downstream 58122 23528740 ~ 23531799 (+)
G487146 LOC106585492 other downstream 182502 23653120 ~ 23667927 (+)
LOC110525563 LOC106585507 other downstream 441203 23911741 ~ 23914297 (+)
G488049 NA other downstream 1109343 24579961 ~ 24586313 (+)
G488078 NA other downstream 1160351 24630969 ~ 24631396 (+)

Expression


Co-expression Network