G487106


Basic Information

Item Value
gene id G487106
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23575451 ~ 23575710 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU553593
cagccttattctacgcacaataccccataatgacaaagtgaaaccaGGTCTAGAAATGTATGCTAATTTAtaacataaaaaacagaaataacttatttacataagtattcagaccctttgctatgagactcgaaattgagctcaggtgcaacctgttcccattgatcatccttgagatgtttctacagcttgattggagtcaacctgtggtaaattaaattgattgaacatgatttggaaaggcacccacacaaggtccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU553593 True 260 lncRNA 0.38 1 23575451 23575710

Neighbor

gene id symbol gene type direction distance location
LOC110525542 NA coding upstream 4799 23560898 ~ 23570652 (+)
LOC110525161 bicdl1 coding upstream 182643 23359077 ~ 23392808 (+)
LOC118964855 LOC106585477 coding upstream 255330 23312041 ~ 23320121 (+)
LOC110525581 LOC106585477 coding upstream 267160 23305581 ~ 23313220 (+)
LOC110525520 LOC106585478 coding upstream 349665 23181353 ~ 23227167 (+)
asgrl1 LOC106585488 coding downstream 20502 23596212 ~ 23606381 (+)
LOC110525547 LOC106585491 coding downstream 32963 23608673 ~ 23609827 (+)
LOC110525549 hnf1a coding downstream 101764 23677474 ~ 23703291 (+)
ggt5a LOC106585500 coding downstream 215734 23791444 ~ 23801151 (+)
LOC110525559 LOC106585501 coding downstream 265765 23841475 ~ 23847341 (+)
G487104 NA non-coding upstream 802 23574385 ~ 23574649 (+)
G487091 NA non-coding upstream 10621 23564133 ~ 23564830 (+)
G487069 kiaa1671 non-coding upstream 60338 23512835 ~ 23515113 (+)
G486527 NA non-coding upstream 104833 23451394 ~ 23470618 (+)
G486525 NA non-coding upstream 128204 23447037 ~ 23447247 (+)
G487109 NA non-coding downstream 3314 23579024 ~ 23579233 (+)
G487122 NA non-coding downstream 15301 23591011 ~ 23591264 (+)
G487124 NA non-coding downstream 17156 23592866 ~ 23593133 (+)
G487125 NA non-coding downstream 17679 23593389 ~ 23593650 (+)
G487144 NA non-coding downstream 68192 23643902 ~ 23644111 (+)
G487078 LOC106585486 other upstream 43652 23528740 ~ 23531799 (+)
LOC110525518 LOC106585474 other upstream 383534 23079630 ~ 23197514 (+)
G486127 NA other upstream 900999 22674242 ~ 22674452 (+)
G485780 NA other upstream 1130832 22441316 ~ 22444619 (+)
G484726 NA other upstream 2021354 21553732 ~ 21554097 (+)
G487146 LOC106585492 other downstream 77410 23653120 ~ 23667927 (+)
LOC110525563 LOC106585507 other downstream 336111 23911741 ~ 23914297 (+)
G488049 NA other downstream 1004251 24579961 ~ 24586313 (+)
G488078 NA other downstream 1055259 24630969 ~ 24631396 (+)
G488258 NA other downstream 1363059 24938769 ~ 24939272 (+)

Expression


Co-expression Network