G487124


Basic Information

Item Value
gene id G487124
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23592866 ~ 23593133 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU553614
TTTTTGGGGtttaggtatcagtgttattaacccctgactcattgtaggagggagaacattgtttttaatactctctaaaaagacttcaaataggaagggagctacttgttcagaaaataatttgtaaaattctgatgtaattccatcaacacctggtgatttattgttctttagatgtttgatagactctataatctcttcaactttgatgggttcatcacactgtttagattctatatcactgatagagtgaacattattcagtgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU553614 True 268 lncRNA 0.33 1 23592866 23593133

Neighbor

gene id symbol gene type direction distance location
LOC110525542 NA coding upstream 22214 23560898 ~ 23570652 (+)
LOC110525161 bicdl1 coding upstream 200058 23359077 ~ 23392808 (+)
LOC118964855 LOC106585477 coding upstream 272745 23312041 ~ 23320121 (+)
LOC110525581 LOC106585477 coding upstream 284575 23305581 ~ 23313220 (+)
LOC110525520 LOC106585478 coding upstream 367080 23181353 ~ 23227167 (+)
asgrl1 LOC106585488 coding downstream 3079 23596212 ~ 23606381 (+)
LOC110525547 LOC106585491 coding downstream 15540 23608673 ~ 23609827 (+)
LOC110525549 hnf1a coding downstream 84341 23677474 ~ 23703291 (+)
ggt5a LOC106585500 coding downstream 198311 23791444 ~ 23801151 (+)
LOC110525559 LOC106585501 coding downstream 248342 23841475 ~ 23847341 (+)
G487122 NA non-coding upstream 1602 23591011 ~ 23591264 (+)
G487109 NA non-coding upstream 13633 23579024 ~ 23579233 (+)
G487106 NA non-coding upstream 17156 23575451 ~ 23575710 (+)
G487104 NA non-coding upstream 18217 23574385 ~ 23574649 (+)
G487091 NA non-coding upstream 28036 23564133 ~ 23564830 (+)
G487125 NA non-coding downstream 256 23593389 ~ 23593650 (+)
G487144 NA non-coding downstream 50769 23643902 ~ 23644111 (+)
G487146 LOC106585492 non-coding downstream 61885 23653120 ~ 23667927 (+)
G487153 NA non-coding downstream 75929 23669062 ~ 23669278 (+)
G487116 NA non-coding downstream 111206 23704339 ~ 23704700 (+)
G487078 LOC106585486 other upstream 61067 23528740 ~ 23531799 (+)
LOC110525518 LOC106585474 other upstream 400949 23079630 ~ 23197514 (+)
G486127 NA other upstream 918414 22674242 ~ 22674452 (+)
G485780 NA other upstream 1148247 22441316 ~ 22444619 (+)
G484726 NA other upstream 2038769 21553732 ~ 21554097 (+)
LOC110525563 LOC106585507 other downstream 318688 23911741 ~ 23914297 (+)
G488049 NA other downstream 986828 24579961 ~ 24586313 (+)
G488078 NA other downstream 1037836 24630969 ~ 24631396 (+)
G488258 NA other downstream 1345636 24938769 ~ 24939272 (+)

Expression


Co-expression Network