G487144


Basic Information

Item Value
gene id G487144
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23643902 ~ 23644111 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU553634
ggtcaggcagaggtcggtaatctagagtagaggcaaaggtacaggcgggcaggcaggctcggtcaaaactagaaaacagggactatAGCAAAGACAGGGTGCACCAGGAACCACTGGTAGGtttgaacaaacaaaacaaactcacacagacagacagacagaaaacacaggtataagtacccatgggataatgaggaagatgggtgacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU553634 True 210 lncRNA 0.49 1 23643902 23644111

Neighbor

gene id symbol gene type direction distance location
LOC110525547 LOC106585491 coding upstream 34075 23608673 ~ 23609827 (+)
asgrl1 LOC106585488 coding upstream 37521 23596212 ~ 23606381 (+)
LOC110525542 NA coding upstream 73250 23560898 ~ 23570652 (+)
LOC110525161 bicdl1 coding upstream 251094 23359077 ~ 23392808 (+)
LOC118964855 LOC106585477 coding upstream 323781 23312041 ~ 23320121 (+)
LOC110525549 hnf1a coding downstream 33363 23677474 ~ 23703291 (+)
ggt5a LOC106585500 coding downstream 147333 23791444 ~ 23801151 (+)
LOC110525559 LOC106585501 coding downstream 197364 23841475 ~ 23847341 (+)
LOC110525560 LOC106585504 coding downstream 213743 23857854 ~ 23884968 (+)
LOC110525563 LOC106585507 coding downstream 267630 23911741 ~ 23914297 (+)
G487125 NA non-coding upstream 50252 23593389 ~ 23593650 (+)
G487124 NA non-coding upstream 50769 23592866 ~ 23593133 (+)
G487122 NA non-coding upstream 52638 23591011 ~ 23591264 (+)
G487109 NA non-coding upstream 64669 23579024 ~ 23579233 (+)
G487106 NA non-coding upstream 68192 23575451 ~ 23575710 (+)
G487146 LOC106585492 non-coding downstream 10907 23653120 ~ 23667927 (+)
G487153 NA non-coding downstream 24951 23669062 ~ 23669278 (+)
G487116 NA non-coding downstream 60228 23704339 ~ 23704700 (+)
G487114 NA non-coding downstream 61438 23705549 ~ 23707548 (+)
G487160 NA non-coding downstream 69914 23714025 ~ 23715430 (+)
G487078 LOC106585486 other upstream 112103 23528740 ~ 23531799 (+)
LOC110525518 LOC106585474 other upstream 451985 23079630 ~ 23197514 (+)
G486127 NA other upstream 969450 22674242 ~ 22674452 (+)
G485780 NA other upstream 1199283 22441316 ~ 22444619 (+)
G484726 NA other upstream 2089805 21553732 ~ 21554097 (+)
G488049 NA other downstream 935850 24579961 ~ 24586313 (+)
G488078 NA other downstream 986858 24630969 ~ 24631396 (+)
G488258 NA other downstream 1294658 24938769 ~ 24939272 (+)

Expression


Co-expression Network