G487546


Basic Information

Item Value
gene id G487546
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23703534 ~ 23704259 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU554119
catgtagtaaccaaaaaagtgttaaacaaatctaaatatatcttatatttgagattcttcagagtagccaccctttgctttgatgacagctttgacattcttggcatcctctcaaccagcatcatgaggtaacggtctctcatgaggaccgccagacaatcggaagacccagagttacctctgctgcagaagaaacacgagtaatggacattagaccagtggaaatatatcctttgatctgatgagtccaaatttgagatttttggttccaaccgctgtgtctttgtgagacgtagagtaggtgaatggaggatctctgcatgtgtggttcccaccataaagcatggaggatgGAGGTGTGatgttgctttgctggtgacactcagtgatttatttataattcaaggcatacttaaccaggatggctaccacagcattctgcagcgatacgccattcccATTcccataatttgtttttcaacaggacaatgacccaacacacctccaggctgtgtaagggctatttgaccaagaaggagagtggtggagtgctgcatcagatgacctggcctccacaatcacccgacctcaacccaattgagatggtttgggatgagttggaccgcagagtgaaggaaaagcagtcaacaagtgctcagcaaatgtgggatctccttcaatattgttggaaatgcattccaggtgaagctggttgagagaatgcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU554119 True 726 lncRNA 0.45 1 23703534 23704259

Neighbor

gene id symbol gene type direction distance location
LOC110525548 LOC106585492 coding downstream 35166 23644995 ~ 23668368 (-)
LOC118965070 LOC106585337 coding downstream 60186 23622807 ~ 23643348 (-)
aakb1 aakb1 coding downstream 85848 23614867 ~ 23617686 (-)
pla2g1b LOC106585490 coding downstream 95708 23606349 ~ 23607826 (-)
LOC110525543 LOC106585487 coding downstream 113182 23588230 ~ 23590352 (-)
LOC110525551 LOC106585494 coding upstream 2298 23706557 ~ 23710228 (-)
LOC110525552 LOC106585495 coding upstream 9692 23713875 ~ 23717830 (-)
LOC110525553 LOC106585496 coding upstream 14121 23718380 ~ 23728979 (-)
LOC110525554 LOC106585497 coding upstream 25741 23730000 ~ 23750838 (-)
LOC110525555 LOC106585499 coding upstream 53545 23757804 ~ 23779720 (-)
G487538 hnf1a non-coding downstream 4019 23697218 ~ 23699515 (-)
G487529 NA non-coding downstream 29388 23673929 ~ 23674146 (-)
G487504 NA non-coding downstream 108551 23594705 ~ 23594983 (-)
G487503 NA non-coding downstream 109380 23593953 ~ 23594154 (-)
G487501 NA non-coding downstream 112477 23590664 ~ 23591057 (-)
G487553 NA non-coding upstream 25049 23729308 ~ 23729536 (-)
G487620 NA non-coding upstream 135503 23839762 ~ 23839997 (-)
G487628 NA non-coding upstream 153603 23857862 ~ 23863007 (-)
LOC110525180 hps4 other downstream 117980 23582127 ~ 23587892 (-)
G487016 NA other downstream 311472 23390017 ~ 23392062 (-)
G487022 bicdl1 other downstream 317627 23385534 ~ 23385907 (-)
G486953 NA other downstream 450173 23251286 ~ 23258106 (-)
G486716 NA other downstream 862968 22837653 ~ 22840566 (-)
G488386 NA other upstream 649274 24353533 ~ 24353823 (-)
LOC110525585 LOC106585524 other upstream 956638 24655788 ~ 24715090 (-)
G489038 NA other upstream 1401946 25106205 ~ 25106570 (-)
G489511 hmcn2 other upstream 1792704 25496963 ~ 25497489 (-)

Expression


Co-expression Network