G487248


Basic Information

Item Value
gene id G487248
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23876128 ~ 23876451 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU553758
cagttggaggccacagaaggagtgttgtatggcatttaagctcatttggaggtttgttaacagtgtccaaagaagggccagatgtatacagaagaggtgcgtagaggtggatcaaggaatcacccacagcaagagcgacatcattgatatatacagagaagagagtcggcccgagaattgaatctTGTTGTaccctcatagagactgccagaggtccgaacaacaggctctctgatttgacacacggaactctgagaagtagttggtgaatcaggcgaggcagtcattagagaaaccaaggctgttgagtctgccgataagaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU553758 True 324 lncRNA 0.47 1 23876128 23876451

Neighbor

gene id symbol gene type direction distance location
LOC110525559 LOC106585501 coding upstream 28787 23841475 ~ 23847341 (+)
ggt5a LOC106585500 coding upstream 74977 23791444 ~ 23801151 (+)
LOC110525549 hnf1a coding upstream 172837 23677474 ~ 23703291 (+)
LOC110525547 LOC106585491 coding upstream 266301 23608673 ~ 23609827 (+)
asgrl1 LOC106585488 coding upstream 269747 23596212 ~ 23606381 (+)
LOC110525563 LOC106585507 coding downstream 35290 23911741 ~ 23914297 (+)
LOC110525298 LOC106585338 coding downstream 49395 23925846 ~ 23941878 (+)
LOC110525570 LOC106585512 coding downstream 165578 24042029 ~ 24042359 (+)
LOC110525569 LOC106585512 coding downstream 166069 24042520 ~ 24046202 (+)
LOC110525573 LOC106585515 coding downstream 203840 24080291 ~ 24122599 (+)
G487236 NA non-coding upstream 27869 23848041 ~ 23848259 (+)
G487228 NA non-coding upstream 39099 23836556 ~ 23837029 (+)
G487188 NA non-coding upstream 53379 23757819 ~ 23822749 (+)
G487220 LOC106585502 non-coding upstream 58803 23814829 ~ 23817325 (+)
G487168 NA non-coding upstream 144156 23731045 ~ 23731972 (+)
G487249 NA non-coding downstream 367 23876818 ~ 23877024 (+)
G487255 LOC106585505 non-coding downstream 13136 23889587 ~ 23891179 (+)
G487257 LOC106585505 non-coding downstream 16750 23893201 ~ 23894262 (+)
G487273 NA non-coding downstream 39007 23915458 ~ 23915639 (+)
G487146 LOC106585492 other upstream 208201 23653120 ~ 23667927 (+)
G487078 LOC106585486 other upstream 344329 23528740 ~ 23531799 (+)
LOC110525518 LOC106585474 other upstream 684211 23079630 ~ 23197514 (+)
G486127 NA other upstream 1201676 22674242 ~ 22674452 (+)
G485780 NA other upstream 1431509 22441316 ~ 22444619 (+)
G488049 NA other downstream 703510 24579961 ~ 24586313 (+)
G488078 NA other downstream 754518 24630969 ~ 24631396 (+)
G488258 NA other downstream 1062318 24938769 ~ 24939272 (+)
si:dkey-191c17.2 LOC106585342 other downstream 1762410 25638816 ~ 25641178 (+)

Expression


Co-expression Network