Gene
RNA
| Item | Value |
|---|---|
| gene id | G487255 |
| gene name | LOC106585505 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 23889587 ~ 23891179 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| lysine-specific demethylase 2B-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU553765 | True | 1109 | lncRNA | 0.41 | 2 | 23889587 | 23891179 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525560 | LOC106585504 | coding | upstream | 4619 | 23857854 ~ 23884968 (+) |
| LOC110525559 | LOC106585501 | coding | upstream | 42246 | 23841475 ~ 23847341 (+) |
| ggt5a | LOC106585500 | coding | upstream | 88436 | 23791444 ~ 23801151 (+) |
| LOC110525549 | hnf1a | coding | upstream | 186296 | 23677474 ~ 23703291 (+) |
| LOC110525547 | LOC106585491 | coding | upstream | 279760 | 23608673 ~ 23609827 (+) |
| LOC110525563 | LOC106585507 | coding | downstream | 20562 | 23911741 ~ 23914297 (+) |
| LOC110525298 | LOC106585338 | coding | downstream | 34667 | 23925846 ~ 23941878 (+) |
| LOC110525570 | LOC106585512 | coding | downstream | 150850 | 24042029 ~ 24042359 (+) |
| LOC110525569 | LOC106585512 | coding | downstream | 151341 | 24042520 ~ 24046202 (+) |
| LOC110525573 | LOC106585515 | coding | downstream | 189112 | 24080291 ~ 24122599 (+) |
| G487249 | NA | non-coding | upstream | 12563 | 23876818 ~ 23877024 (+) |
| G487248 | NA | non-coding | upstream | 13136 | 23876128 ~ 23876451 (+) |
| G487236 | NA | non-coding | upstream | 41328 | 23848041 ~ 23848259 (+) |
| G487228 | NA | non-coding | upstream | 52558 | 23836556 ~ 23837029 (+) |
| G487188 | NA | non-coding | upstream | 66838 | 23757819 ~ 23822749 (+) |
| G487257 | LOC106585505 | non-coding | downstream | 2022 | 23893201 ~ 23894262 (+) |
| G487273 | NA | non-coding | downstream | 24279 | 23915458 ~ 23915639 (+) |
| G487298 | NA | non-coding | downstream | 66802 | 23957981 ~ 23958251 (+) |
| G487307 | NA | non-coding | downstream | 82100 | 23973279 ~ 23973525 (+) |
| G487146 | LOC106585492 | other | upstream | 221660 | 23653120 ~ 23667927 (+) |
| G487078 | LOC106585486 | other | upstream | 357788 | 23528740 ~ 23531799 (+) |
| LOC110525518 | LOC106585474 | other | upstream | 697670 | 23079630 ~ 23197514 (+) |
| G486127 | NA | other | upstream | 1215135 | 22674242 ~ 22674452 (+) |
| G485780 | NA | other | upstream | 1444968 | 22441316 ~ 22444619 (+) |
| G488049 | NA | other | downstream | 688782 | 24579961 ~ 24586313 (+) |
| G488078 | NA | other | downstream | 739790 | 24630969 ~ 24631396 (+) |
| G488258 | NA | other | downstream | 1047590 | 24938769 ~ 24939272 (+) |
| si:dkey-191c17.2 | LOC106585342 | other | downstream | 1747682 | 25638816 ~ 25641178 (+) |
