G487307


Basic Information

Item Value
gene id G487307
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23973279 ~ 23973525 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU553822
GATCGTGGTTGGCCTATAGGTTTAACTTGCTTTACTTTGATCGTGGTTGGCCTATAGGTTTAACTTGCTTTACTTTGATCGTGGTTGGCCTATAGGTTTAACTTGCTTTACTTTGATCGTGGTTGGCCTATAGGTTTAACTTGCTTTACTTTGATCGTGGTTGGCCTATAGGTTTAACTTGCTTTACTTTGATCGTGGTTGGCCTATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU553822 True 209 lncRNA 0.41 2 23973279 23973525

Neighbor

gene id symbol gene type direction distance location
LOC110525298 LOC106585338 coding upstream 31401 23925846 ~ 23941878 (+)
LOC110525563 LOC106585507 coding upstream 58982 23911741 ~ 23914297 (+)
LOC110525560 LOC106585504 coding upstream 88311 23857854 ~ 23884968 (+)
LOC110525559 LOC106585501 coding upstream 125938 23841475 ~ 23847341 (+)
ggt5a LOC106585500 coding upstream 172128 23791444 ~ 23801151 (+)
LOC110525570 LOC106585512 coding downstream 68504 24042029 ~ 24042359 (+)
LOC110525569 LOC106585512 coding downstream 68995 24042520 ~ 24046202 (+)
LOC110525573 LOC106585515 coding downstream 106766 24080291 ~ 24122599 (+)
rflna LOC106585519 coding downstream 328211 24301736 ~ 24314535 (+)
stx2b LOC106585525 coding downstream 742821 24716346 ~ 24724878 (+)
G487298 NA non-coding upstream 15028 23957981 ~ 23958251 (+)
G487273 NA non-coding upstream 57640 23915458 ~ 23915639 (+)
G487257 LOC106585505 non-coding upstream 79017 23893201 ~ 23894262 (+)
G487255 LOC106585505 non-coding upstream 82100 23889587 ~ 23891179 (+)
G487330 NA non-coding downstream 39885 24013410 ~ 24013807 (+)
G487331 NA non-coding downstream 42687 24016212 ~ 24016774 (+)
G487334 NA non-coding downstream 46016 24019541 ~ 24022100 (+)
G487341 LOC106585510 non-coding downstream 60194 24033719 ~ 24034426 (+)
G487357 NA non-coding downstream 83351 24056876 ~ 24118692 (+)
G487146 LOC106585492 other upstream 305352 23653120 ~ 23667927 (+)
G487078 LOC106585486 other upstream 441480 23528740 ~ 23531799 (+)
LOC110525518 LOC106585474 other upstream 781362 23079630 ~ 23197514 (+)
G486127 NA other upstream 1298827 22674242 ~ 22674452 (+)
G488049 NA other downstream 606436 24579961 ~ 24586313 (+)
G488078 NA other downstream 657444 24630969 ~ 24631396 (+)
G488258 NA other downstream 965244 24938769 ~ 24939272 (+)
si:dkey-191c17.2 LOC106585342 other downstream 1665336 25638816 ~ 25641178 (+)
G489447 NA other downstream 1710161 25683686 ~ 25684311 (+)

Expression


Co-expression Network