G487357


Basic Information

Item Value
gene id G487357
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 24056876 ~ 24118692 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU553876
ACCCATCCCAAACATGTAGGCTAAATTTCCGCTGGTCTTTATACCCCCATCAGCAGACCCTGAGATTTGTACACATTTATGAATAGGGTTATAGATCAAGAGTATTTCCATATTGTTCAGGGTTAGGAGTTCGTTCAACTCCTgtcgagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU553876 True 218 lncRNA 0.44 2 24056876 24118692

Neighbor

gene id symbol gene type direction distance location
LOC110525569 LOC106585512 coding upstream 10674 24042520 ~ 24046202 (+)
LOC110525570 LOC106585512 coding upstream 14517 24042029 ~ 24042359 (+)
LOC110525298 LOC106585338 coding upstream 114998 23925846 ~ 23941878 (+)
LOC110525563 LOC106585507 coding upstream 142579 23911741 ~ 23914297 (+)
LOC110525560 LOC106585504 coding upstream 171908 23857854 ~ 23884968 (+)
rflna LOC106585519 coding downstream 183044 24301736 ~ 24314535 (+)
stx2b LOC106585525 coding downstream 597654 24716346 ~ 24724878 (+)
LOC110525587 LOC106585527 coding downstream 615140 24733832 ~ 24872673 (+)
LOC110525720 LOC106585530 coding downstream 878872 24997564 ~ 25054975 (+)
LOC110525590 LOC106585531 coding downstream 996691 25115383 ~ 25162130 (+)
G487341 LOC106585510 non-coding upstream 22450 24033719 ~ 24034426 (+)
G487334 NA non-coding upstream 34776 24019541 ~ 24022100 (+)
G487331 NA non-coding upstream 40102 24016212 ~ 24016774 (+)
G487330 NA non-coding upstream 43069 24013410 ~ 24013807 (+)
G487307 NA non-coding upstream 83351 23973279 ~ 23973525 (+)
G487401 LOC106585516 non-coding downstream 10723 24129415 ~ 24134143 (+)
G487442 NA non-coding downstream 85173 24203865 ~ 24204080 (+)
G487372 NA non-coding downstream 88332 24207024 ~ 24209275 (+)
G487453 NA non-coding downstream 105953 24224645 ~ 24224959 (+)
G487455 NA non-coding downstream 107571 24226263 ~ 24226582 (+)
G487146 LOC106585492 other upstream 388949 23653120 ~ 23667927 (+)
G487078 LOC106585486 other upstream 525077 23528740 ~ 23531799 (+)
LOC110525518 LOC106585474 other upstream 864959 23079630 ~ 23197514 (+)
G486127 NA other upstream 1382424 22674242 ~ 22674452 (+)
G488049 NA other downstream 461269 24579961 ~ 24586313 (+)
G488078 NA other downstream 512277 24630969 ~ 24631396 (+)
G488258 NA other downstream 820077 24938769 ~ 24939272 (+)
si:dkey-191c17.2 LOC106585342 other downstream 1520169 25638816 ~ 25641178 (+)
G489447 NA other downstream 1564994 25683686 ~ 25684311 (+)

Expression


Co-expression Network