Gene
RNA
| Item | Value |
|---|---|
| gene id | G487820 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 24234802 ~ 24235048 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU554446 | True | 247 | lncRNA | 0.38 | 1 | 24234802 | 24235048 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccdc92 | LOC106585518 | coding | downstream | 10542 | 24211144 ~ 24224260 (-) |
| dtx1 | LOC106585516 | coding | downstream | 50433 | 24129400 ~ 24184369 (-) |
| LOC110525317 | dgcr6 | coding | downstream | 155754 | 24072614 ~ 24079048 (-) |
| LOC110525572 | LOC106585514 | coding | downstream | 163097 | 24059911 ~ 24071705 (-) |
| LOC110525567 | LOC106585510 | coding | downstream | 192882 | 24032069 ~ 24041920 (-) |
| ncor2 | LOC106585520 | coding | upstream | 82864 | 24317912 ~ 24504123 (-) |
| LOC118965019 | LOC106585477 | coding | upstream | 322439 | 24557487 ~ 24566324 (-) |
| LOC118965071 | LOC106585477 | coding | upstream | 343657 | 24578705 ~ 24579373 (-) |
| ep400 | LOC106579917 | coding | upstream | 362922 | 24597970 ~ 24634358 (-) |
| LOC110525585 | LOC106585524 | coding | upstream | 420740 | 24655788 ~ 24715090 (-) |
| G487754 | NA | non-coding | downstream | 25521 | 24207065 ~ 24209281 (-) |
| G487807 | NA | non-coding | downstream | 29570 | 24204881 ~ 24205232 (-) |
| G487805 | NA | non-coding | downstream | 32551 | 24201922 ~ 24202251 (-) |
| G487801 | NA | non-coding | downstream | 36105 | 24198066 ~ 24198697 (-) |
| G487798 | NA | non-coding | downstream | 39727 | 24194762 ~ 24195075 (-) |
| G487821 | NA | non-coding | upstream | 155 | 24235203 ~ 24235484 (-) |
| G487826 | NA | non-coding | upstream | 6806 | 24241854 ~ 24242060 (-) |
| G488329 | LOC106585519 | non-coding | upstream | 77243 | 24312291 ~ 24314486 (-) |
| G488444 | NA | non-coding | upstream | 273288 | 24508336 ~ 24508631 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 517019 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 649248 | 23582127 ~ 23587892 (-) |
| G487016 | NA | other | downstream | 842740 | 23390017 ~ 23392062 (-) |
| G487022 | bicdl1 | other | downstream | 848895 | 23385534 ~ 23385907 (-) |
| G486953 | NA | other | downstream | 981441 | 23251286 ~ 23258106 (-) |
| G488386 | NA | other | upstream | 118485 | 24353533 ~ 24353823 (-) |
| G489038 | NA | other | upstream | 871157 | 25106205 ~ 25106570 (-) |
| G489511 | hmcn2 | other | upstream | 1261915 | 25496963 ~ 25497489 (-) |
| LOC110525606 | LOC106585545 | other | upstream | 2044659 | 26271759 ~ 26283169 (-) |
