G487461


Basic Information

Item Value
gene id G487461
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 24240782 ~ 24241082 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU553991
gatgaatacgctgattcggtgagcgggtttattagcaagtgcatcggtgatgtcgtGCCCACagtgtctattaaaacattcccaaaccagaaaccgtggattgatggcagcattcacgcaaaactgaaagagcgaaccactgcttttaatcagggcaaggtgaccggtaacatgaccgaatacagacagtgtagctattccctccgcaaggcaatcaaacaagctaagcgtcagtacagagacaaagtagagtcacaattcaagggctcagacacgagaggtatgtggcagggtctacagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU553991 True 301 lncRNA 0.48 1 24240782 24241082

Neighbor

gene id symbol gene type direction distance location
LOC110525573 LOC106585515 coding upstream 118183 24080291 ~ 24122599 (+)
LOC110525569 LOC106585512 coding upstream 194580 24042520 ~ 24046202 (+)
LOC110525570 LOC106585512 coding upstream 198423 24042029 ~ 24042359 (+)
LOC110525298 LOC106585338 coding upstream 298904 23925846 ~ 23941878 (+)
LOC110525563 LOC106585507 coding upstream 326485 23911741 ~ 23914297 (+)
rflna LOC106585519 coding downstream 60654 24301736 ~ 24314535 (+)
stx2b LOC106585525 coding downstream 475264 24716346 ~ 24724878 (+)
LOC110525587 LOC106585527 coding downstream 492750 24733832 ~ 24872673 (+)
LOC110525720 LOC106585530 coding downstream 756482 24997564 ~ 25054975 (+)
LOC110525590 LOC106585531 coding downstream 874301 25115383 ~ 25162130 (+)
G487459 NA non-coding upstream 2777 24237771 ~ 24238005 (+)
G487458 NA non-coding upstream 4441 24236099 ~ 24236341 (+)
G487456 NA non-coding upstream 11654 24228913 ~ 24229128 (+)
G487455 NA non-coding upstream 14200 24226263 ~ 24226582 (+)
G487453 NA non-coding upstream 15823 24224645 ~ 24224959 (+)
G487465 NA non-coding downstream 5824 24246906 ~ 24247127 (+)
G487922 NA non-coding downstream 151994 24393076 ~ 24395465 (+)
G487982 NA non-coding downstream 236022 24477104 ~ 24478371 (+)
G487998 NA non-coding downstream 267341 24508423 ~ 24508646 (+)
G488021 NA non-coding downstream 298987 24540069 ~ 24540278 (+)
G487146 LOC106585492 other upstream 572855 23653120 ~ 23667927 (+)
G487078 LOC106585486 other upstream 708983 23528740 ~ 23531799 (+)
LOC110525518 LOC106585474 other upstream 1048865 23079630 ~ 23197514 (+)
G486127 NA other upstream 1566330 22674242 ~ 22674452 (+)
G488049 NA other downstream 338879 24579961 ~ 24586313 (+)
G488078 NA other downstream 389887 24630969 ~ 24631396 (+)
G488258 NA other downstream 697687 24938769 ~ 24939272 (+)
si:dkey-191c17.2 LOC106585342 other downstream 1397779 25638816 ~ 25641178 (+)
G489447 NA other downstream 1442604 25683686 ~ 25684311 (+)

Expression


Co-expression Network