Gene
RNA
| Item | Value |
|---|---|
| gene id | G487922 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 24393076 ~ 24395465 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU554569 | True | 227 | lncRNA | 0.50 | 2 | 24393076 | 24395465 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rflna | LOC106585519 | coding | upstream | 78541 | 24301736 ~ 24314535 (+) |
| LOC110525573 | LOC106585515 | coding | upstream | 270477 | 24080291 ~ 24122599 (+) |
| LOC110525569 | LOC106585512 | coding | upstream | 346874 | 24042520 ~ 24046202 (+) |
| LOC110525570 | LOC106585512 | coding | upstream | 350717 | 24042029 ~ 24042359 (+) |
| LOC110525298 | LOC106585338 | coding | upstream | 451198 | 23925846 ~ 23941878 (+) |
| stx2b | LOC106585525 | coding | downstream | 320881 | 24716346 ~ 24724878 (+) |
| LOC110525587 | LOC106585527 | coding | downstream | 338367 | 24733832 ~ 24872673 (+) |
| LOC110525720 | LOC106585530 | coding | downstream | 602099 | 24997564 ~ 25054975 (+) |
| LOC110525590 | LOC106585531 | coding | downstream | 719918 | 25115383 ~ 25162130 (+) |
| LOC110525592 | LOC106585533 | coding | downstream | 996233 | 25391698 ~ 25399930 (+) |
| G487465 | NA | non-coding | upstream | 145949 | 24246906 ~ 24247127 (+) |
| G487461 | NA | non-coding | upstream | 151994 | 24240782 ~ 24241082 (+) |
| G487459 | NA | non-coding | upstream | 155071 | 24237771 ~ 24238005 (+) |
| G487458 | NA | non-coding | upstream | 156735 | 24236099 ~ 24236341 (+) |
| G487456 | NA | non-coding | upstream | 163948 | 24228913 ~ 24229128 (+) |
| G487982 | NA | non-coding | downstream | 81639 | 24477104 ~ 24478371 (+) |
| G487998 | NA | non-coding | downstream | 112958 | 24508423 ~ 24508646 (+) |
| G488021 | NA | non-coding | downstream | 144604 | 24540069 ~ 24540278 (+) |
| G488023 | NA | non-coding | downstream | 146344 | 24541809 ~ 24542040 (+) |
| G488027 | NA | non-coding | downstream | 149544 | 24545009 ~ 24545279 (+) |
| LOC110525563 | LOC106585507 | other | upstream | 478826 | 23911741 ~ 23914297 (+) |
| G487146 | LOC106585492 | other | upstream | 725149 | 23653120 ~ 23667927 (+) |
| G487078 | LOC106585486 | other | upstream | 861277 | 23528740 ~ 23531799 (+) |
| LOC110525518 | LOC106585474 | other | upstream | 1201159 | 23079630 ~ 23197514 (+) |
| G486127 | NA | other | upstream | 1718624 | 22674242 ~ 22674452 (+) |
| G488049 | NA | other | downstream | 184496 | 24579961 ~ 24586313 (+) |
| G488078 | NA | other | downstream | 235504 | 24630969 ~ 24631396 (+) |
| G488258 | NA | other | downstream | 543304 | 24938769 ~ 24939272 (+) |
| si:dkey-191c17.2 | LOC106585342 | other | downstream | 1243396 | 25638816 ~ 25641178 (+) |
| G489447 | NA | other | downstream | 1288221 | 25683686 ~ 25684311 (+) |
