G488023


Basic Information

Item Value
gene id G488023
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 24541809 ~ 24542040 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU554674
attcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagtgggccgaatactttcgcaaggcactgtatgtgattgaatattatctgctgttggcttgtgtggatgtatgtatgtgttatgcaacatagctgacttgagacattgttaacagtttcagggccatgggcctttctcatgatggaaaagtacagaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU554674 True 232 lncRNA 0.38 1 24541809 24542040

Neighbor

gene id symbol gene type direction distance location
rflna LOC106585519 coding upstream 227274 24301736 ~ 24314535 (+)
LOC110525573 LOC106585515 coding upstream 419210 24080291 ~ 24122599 (+)
LOC110525569 LOC106585512 coding upstream 495607 24042520 ~ 24046202 (+)
LOC110525570 LOC106585512 coding upstream 499450 24042029 ~ 24042359 (+)
LOC110525298 LOC106585338 coding upstream 599931 23925846 ~ 23941878 (+)
stx2b LOC106585525 coding downstream 174306 24716346 ~ 24724878 (+)
LOC110525587 LOC106585527 coding downstream 191792 24733832 ~ 24872673 (+)
LOC110525720 LOC106585530 coding downstream 455524 24997564 ~ 25054975 (+)
LOC110525590 LOC106585531 coding downstream 573343 25115383 ~ 25162130 (+)
LOC110525592 LOC106585533 coding downstream 849658 25391698 ~ 25399930 (+)
G488021 NA non-coding upstream 1531 24540069 ~ 24540278 (+)
G487998 NA non-coding upstream 33163 24508423 ~ 24508646 (+)
G487982 NA non-coding upstream 63438 24477104 ~ 24478371 (+)
G487922 NA non-coding upstream 146344 24393076 ~ 24395465 (+)
G487465 NA non-coding upstream 294682 24246906 ~ 24247127 (+)
G488027 NA non-coding downstream 2969 24545009 ~ 24545279 (+)
G488077 LOC106585522 non-coding downstream 87164 24629204 ~ 24629820 (+)
G488079 LOC106585522 non-coding downstream 90036 24632076 ~ 24633377 (+)
G488088 NA non-coding downstream 100546 24642586 ~ 24642833 (+)
G488091 NA non-coding downstream 102992 24645032 ~ 24672992 (+)
LOC110525563 LOC106585507 other upstream 627559 23911741 ~ 23914297 (+)
G487146 LOC106585492 other upstream 873882 23653120 ~ 23667927 (+)
G487078 LOC106585486 other upstream 1010010 23528740 ~ 23531799 (+)
LOC110525518 LOC106585474 other upstream 1349892 23079630 ~ 23197514 (+)
G486127 NA other upstream 1867357 22674242 ~ 22674452 (+)
G488049 NA other downstream 37921 24579961 ~ 24586313 (+)
G488078 NA other downstream 88929 24630969 ~ 24631396 (+)
G488258 NA other downstream 396729 24938769 ~ 24939272 (+)
si:dkey-191c17.2 LOC106585342 other downstream 1096821 25638816 ~ 25641178 (+)
G489447 NA other downstream 1141646 25683686 ~ 25684311 (+)

Expression


Co-expression Network