G488078


Basic Information

Item Value
gene id G488078
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 24630969 ~ 24631396 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU554735
CATCTTCCCAGTGAGAGGCTACTCCTTTTCTTCAgacttgtttttattttattttttatcttcttCCCCATTTTAGCCCGGTCTAGAGAAAAAGAGCATGCTGGGAGAGCTAAGACTGAACTTCCTGAGGTCTGTTGGGGTGTCTGTCCAGCGGATGGATGAAGATCGCTTTGTTGATGCTGCTTGGAGGTTTTCGTTGGAGACGATGGGACGTTGTTGGAATTCAGTTTGTTTCTTTGGATTAAGGACACGTCCAGCAGCATTGAATAGAACACAGAACGGCCTGGTAGTAGCACTCCTACCTTGCGCTGTTGGCATAAGCTGCTGGAGTGGAACGCCAGGTGATCCTAAAGAACCAGGATGCTGGAAAATCATTCCATGGCGACCAACTTCAATCCGGGACCTCTTAGCCTGATCTGGGATTTAAA

Function

NR:

description
PREDICTED: E1A-binding protein p400-like isoform X9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU554735 True 428 TUCP 0.47 1 24630969 24631396
Loading

Neighbor

gene id symbol gene type direction distance location
rflna LOC106585519 coding upstream 316434 24301736 ~ 24314535 (+)
LOC110525573 LOC106585515 coding upstream 508370 24080291 ~ 24122599 (+)
LOC110525569 LOC106585512 coding upstream 584767 24042520 ~ 24046202 (+)
LOC110525570 LOC106585512 coding upstream 588610 24042029 ~ 24042359 (+)
LOC110525298 LOC106585338 coding upstream 689091 23925846 ~ 23941878 (+)
stx2b LOC106585525 coding downstream 84950 24716346 ~ 24724878 (+)
LOC110525587 LOC106585527 coding downstream 102436 24733832 ~ 24872673 (+)
LOC110525720 LOC106585530 coding downstream 366168 24997564 ~ 25054975 (+)
LOC110525590 LOC106585531 coding downstream 483987 25115383 ~ 25162130 (+)
LOC110525592 LOC106585533 coding downstream 760302 25391698 ~ 25399930 (+)
G488077 LOC106585522 non-coding upstream 1149 24629204 ~ 24629820 (+)
G488027 NA non-coding upstream 85690 24545009 ~ 24545279 (+)
G488023 NA non-coding upstream 88929 24541809 ~ 24542040 (+)
G488021 NA non-coding upstream 90691 24540069 ~ 24540278 (+)
G487998 NA non-coding upstream 122323 24508423 ~ 24508646 (+)
G488079 LOC106585522 non-coding downstream 680 24632076 ~ 24633377 (+)
G488088 NA non-coding downstream 11190 24642586 ~ 24642833 (+)
G488091 NA non-coding downstream 13636 24645032 ~ 24672992 (+)
G488106 NA non-coding downstream 44493 24675889 ~ 24676095 (+)
G488110 NA non-coding downstream 52838 24684234 ~ 24684493 (+)
G488049 NA other upstream 44656 24579961 ~ 24586313 (+)
LOC110525563 LOC106585507 other upstream 716719 23911741 ~ 23914297 (+)
G487146 LOC106585492 other upstream 963042 23653120 ~ 23667927 (+)
G487078 LOC106585486 other upstream 1099170 23528740 ~ 23531799 (+)
LOC110525518 LOC106585474 other upstream 1439052 23079630 ~ 23197514 (+)
G488258 NA other downstream 307373 24938769 ~ 24939272 (+)
si:dkey-191c17.2 LOC106585342 other downstream 1007465 25638816 ~ 25641178 (+)
G489447 NA other downstream 1052290 25683686 ~ 25684311 (+)
LOC110525642 bin3 other downstream 2857200 27488557 ~ 27543022 (+)
LOC110525650 LOC106585598 other downstream 3148234 27738953 ~ 27793944 (+)

Expression

G488078 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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G488078 Expression in each Bioproject

Bar chart with 12 bars.
G488078 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 12.
End of interactive chart.

Co-expression Network