Gene
RNA
| Item | Value |
|---|---|
| gene id | G488505 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 24640525 ~ 24640755 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU555273 | True | 231 | lncRNA | 0.44 | 1 | 24640525 | 24640755 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ep400 | LOC106579917 | coding | downstream | 6167 | 24597970 ~ 24634358 (-) |
| LOC118965071 | LOC106585477 | coding | downstream | 61152 | 24578705 ~ 24579373 (-) |
| LOC118965019 | LOC106585477 | coding | downstream | 74201 | 24557487 ~ 24566324 (-) |
| ncor2 | LOC106585520 | coding | downstream | 136402 | 24317912 ~ 24504123 (-) |
| ccdc92 | LOC106585518 | coding | downstream | 416265 | 24211144 ~ 24224260 (-) |
| LOC110525585 | LOC106585524 | coding | upstream | 15033 | 24655788 ~ 24715090 (-) |
| piwil1 | piwil1 | coding | upstream | 232468 | 24873223 ~ 24885005 (-) |
| LOC110525589 | LOC106585529 | coding | upstream | 270872 | 24911627 ~ 24917852 (-) |
| LOC110525591 | LOC106579906 | coding | upstream | 532106 | 25172861 ~ 25375482 (-) |
| LOC110525597 | NA | coding | upstream | 808264 | 25449019 ~ 25451212 (-) |
| G488487 | NA | non-coding | downstream | 44465 | 24592542 ~ 24596060 (-) |
| G488471 | LOC106585521 | non-coding | downstream | 47040 | 24545395 ~ 24593485 (-) |
| G488468 | NA | non-coding | downstream | 97630 | 24542366 ~ 24542895 (-) |
| G488463 | NA | non-coding | downstream | 98885 | 24540846 ~ 24541640 (-) |
| G488462 | NA | non-coding | downstream | 101100 | 24539224 ~ 24539425 (-) |
| G488506 | NA | non-coding | upstream | 1203 | 24641958 ~ 24642184 (-) |
| G488507 | NA | non-coding | upstream | 1462 | 24642217 ~ 24642779 (-) |
| G488508 | NA | non-coding | upstream | 2954 | 24643709 ~ 24644217 (-) |
| G488533 | NA | non-coding | upstream | 34566 | 24675321 ~ 24675587 (-) |
| G488543 | NA | non-coding | upstream | 45331 | 24686086 ~ 24686286 (-) |
| G488386 | NA | other | downstream | 286702 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 922742 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 1054971 | 23582127 ~ 23587892 (-) |
| G487016 | NA | other | downstream | 1248463 | 23390017 ~ 23392062 (-) |
| G487022 | bicdl1 | other | downstream | 1254618 | 23385534 ~ 23385907 (-) |
| G489038 | NA | other | upstream | 465450 | 25106205 ~ 25106570 (-) |
| G489511 | hmcn2 | other | upstream | 856208 | 25496963 ~ 25497489 (-) |
| LOC110525606 | LOC106585545 | other | upstream | 1638952 | 26271759 ~ 26283169 (-) |
| tmem230b | LOC106585554 | other | upstream | 1814977 | 26455731 ~ 26457883 (-) |
