Gene
RNA
| Item | Value |
|---|---|
| gene id | G489048 |
| gene name | LOC106585531 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 25117642 ~ 25117916 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| solute carrier family 15 member 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU555836 | True | 275 | lncRNA | 0.54 | 1 | 25117642 | 25117916 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525589 | LOC106585529 | coding | downstream | 199790 | 24911627 ~ 24917852 (-) |
| piwil1 | piwil1 | coding | downstream | 232637 | 24873223 ~ 24885005 (-) |
| LOC110525585 | LOC106585524 | coding | downstream | 402552 | 24655788 ~ 24715090 (-) |
| ep400 | LOC106579917 | coding | downstream | 483284 | 24597970 ~ 24634358 (-) |
| LOC118965071 | LOC106585477 | coding | downstream | 538269 | 24578705 ~ 24579373 (-) |
| LOC110525591 | LOC106579906 | coding | upstream | 54945 | 25172861 ~ 25375482 (-) |
| LOC110525597 | NA | coding | upstream | 331103 | 25449019 ~ 25451212 (-) |
| LOC110525601 | LOC106585539 | coding | upstream | 525316 | 25643232 ~ 25660249 (-) |
| lmx1bb | LOC106585540 | coding | upstream | 586258 | 25704174 ~ 25768796 (-) |
| pbx3b | LOC106585542 | coding | upstream | 861038 | 25978954 ~ 26067633 (-) |
| G489044 | NA | non-coding | downstream | 4988 | 25112364 ~ 25112654 (-) |
| G489035 | NA | non-coding | downstream | 14557 | 25102640 ~ 25103085 (-) |
| G489034 | NA | non-coding | downstream | 15126 | 25102110 ~ 25102516 (-) |
| G489031 | NA | non-coding | downstream | 18367 | 25099061 ~ 25099275 (-) |
| G489029 | NA | non-coding | downstream | 20414 | 25096724 ~ 25097228 (-) |
| G489052 | NA | non-coding | upstream | 4099 | 25122015 ~ 25122298 (-) |
| G489053 | NA | non-coding | upstream | 4829 | 25122745 ~ 25123023 (-) |
| G489054 | NA | non-coding | upstream | 5747 | 25123663 ~ 25123866 (-) |
| G489058 | NA | non-coding | upstream | 12579 | 25130495 ~ 25130709 (-) |
| G489062 | NA | non-coding | upstream | 15501 | 25133417 ~ 25133658 (-) |
| G489038 | NA | other | downstream | 11072 | 25106205 ~ 25106570 (-) |
| G488386 | NA | other | downstream | 763819 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 1399859 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 1532088 | 23582127 ~ 23587892 (-) |
| G489511 | hmcn2 | other | upstream | 379047 | 25496963 ~ 25497489 (-) |
| LOC110525606 | LOC106585545 | other | upstream | 1161791 | 26271759 ~ 26283169 (-) |
| tmem230b | LOC106585554 | other | upstream | 1337816 | 26455731 ~ 26457883 (-) |
| LOC110525619 | LOC106585557 | other | upstream | 1429306 | 26481087 ~ 26551627 (-) |
| G491291 | NA | other | upstream | 1706951 | 26824867 ~ 26867158 (-) |
