Gene
RNA
| Item | Value |
|---|---|
| gene id | G489072 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 25149113 ~ 25149270 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| solute carrier family 15 member 4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU555860 | True | 158 | lncRNA | 0.55 | 1 | 25149113 | 25149270 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525589 | LOC106585529 | coding | downstream | 231261 | 24911627 ~ 24917852 (-) |
| piwil1 | piwil1 | coding | downstream | 264108 | 24873223 ~ 24885005 (-) |
| LOC110525585 | LOC106585524 | coding | downstream | 434023 | 24655788 ~ 24715090 (-) |
| ep400 | LOC106579917 | coding | downstream | 514755 | 24597970 ~ 24634358 (-) |
| LOC118965071 | LOC106585477 | coding | downstream | 569740 | 24578705 ~ 24579373 (-) |
| LOC110525591 | LOC106579906 | coding | upstream | 23591 | 25172861 ~ 25375482 (-) |
| LOC110525597 | NA | coding | upstream | 299749 | 25449019 ~ 25451212 (-) |
| LOC110525601 | LOC106585539 | coding | upstream | 493962 | 25643232 ~ 25660249 (-) |
| lmx1bb | LOC106585540 | coding | upstream | 554904 | 25704174 ~ 25768796 (-) |
| pbx3b | LOC106585542 | coding | upstream | 829684 | 25978954 ~ 26067633 (-) |
| G489069 | NA | non-coding | downstream | 5455 | 25142449 ~ 25143658 (-) |
| G489068 | NA | non-coding | downstream | 6773 | 25141367 ~ 25142340 (-) |
| G489062 | NA | non-coding | downstream | 15455 | 25133417 ~ 25133658 (-) |
| G489058 | NA | non-coding | downstream | 18404 | 25130495 ~ 25130709 (-) |
| G489054 | NA | non-coding | downstream | 25247 | 25123663 ~ 25123866 (-) |
| G489070 | NA | non-coding | upstream | 11194 | 25160464 ~ 25162084 (-) |
| G489076 | NA | non-coding | upstream | 17528 | 25166798 ~ 25167060 (-) |
| G489083 | NA | non-coding | upstream | 26445 | 25175715 ~ 25175957 (-) |
| G489088 | NA | non-coding | upstream | 34220 | 25183490 ~ 25184124 (-) |
| G489038 | NA | other | downstream | 42543 | 25106205 ~ 25106570 (-) |
| G488386 | NA | other | downstream | 795290 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 1431330 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 1563559 | 23582127 ~ 23587892 (-) |
| G489511 | hmcn2 | other | upstream | 347693 | 25496963 ~ 25497489 (-) |
| LOC110525606 | LOC106585545 | other | upstream | 1130437 | 26271759 ~ 26283169 (-) |
| tmem230b | LOC106585554 | other | upstream | 1306462 | 26455731 ~ 26457883 (-) |
| LOC110525619 | LOC106585557 | other | upstream | 1397952 | 26481087 ~ 26551627 (-) |
| G491291 | NA | other | upstream | 1675597 | 26824867 ~ 26867158 (-) |
