Gene
RNA
| Item | Value |
|---|---|
| gene id | G489083 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 25175715 ~ 25175957 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU555871 | True | 243 | lncRNA | 0.45 | 1 | 25175715 | 25175957 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525589 | LOC106585529 | coding | downstream | 257863 | 24911627 ~ 24917852 (-) |
| piwil1 | piwil1 | coding | downstream | 290710 | 24873223 ~ 24885005 (-) |
| LOC110525585 | LOC106585524 | coding | downstream | 460625 | 24655788 ~ 24715090 (-) |
| ep400 | LOC106579917 | coding | downstream | 541357 | 24597970 ~ 24634358 (-) |
| LOC118965071 | LOC106585477 | coding | downstream | 596342 | 24578705 ~ 24579373 (-) |
| LOC110525597 | NA | coding | upstream | 273062 | 25449019 ~ 25451212 (-) |
| LOC110525601 | LOC106585539 | coding | upstream | 467275 | 25643232 ~ 25660249 (-) |
| lmx1bb | LOC106585540 | coding | upstream | 528217 | 25704174 ~ 25768796 (-) |
| pbx3b | LOC106585542 | coding | upstream | 802997 | 25978954 ~ 26067633 (-) |
| LOC110525604 | LOC106585543 | coding | upstream | 1058595 | 26234552 ~ 26264035 (-) |
| LOC110525591 | LOC106579906 | non-coding | downstream | 2438 | 25172861 ~ 25375482 (-) |
| G489076 | NA | non-coding | downstream | 8655 | 25166798 ~ 25167060 (-) |
| G489070 | NA | non-coding | downstream | 13631 | 25160464 ~ 25162084 (-) |
| G489072 | NA | non-coding | downstream | 26445 | 25149113 ~ 25149270 (-) |
| G489069 | NA | non-coding | downstream | 32057 | 25142449 ~ 25143658 (-) |
| G489088 | NA | non-coding | upstream | 7533 | 25183490 ~ 25184124 (-) |
| G489095 | NA | non-coding | upstream | 20475 | 25196432 ~ 25196643 (-) |
| G489111 | NA | non-coding | upstream | 40286 | 25216243 ~ 25216451 (-) |
| G489126 | NA | non-coding | upstream | 59925 | 25235882 ~ 25236083 (-) |
| G489133 | NA | non-coding | upstream | 67128 | 25243085 ~ 25243459 (-) |
| G489038 | NA | other | downstream | 69145 | 25106205 ~ 25106570 (-) |
| G488386 | NA | other | downstream | 821892 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 1457932 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 1590161 | 23582127 ~ 23587892 (-) |
| G489511 | hmcn2 | other | upstream | 321006 | 25496963 ~ 25497489 (-) |
| LOC110525606 | LOC106585545 | other | upstream | 1103750 | 26271759 ~ 26283169 (-) |
| tmem230b | LOC106585554 | other | upstream | 1279775 | 26455731 ~ 26457883 (-) |
| LOC110525619 | LOC106585557 | other | upstream | 1371265 | 26481087 ~ 26551627 (-) |
| G491291 | NA | other | upstream | 1648910 | 26824867 ~ 26867158 (-) |
