Gene
RNA
| Item | Value |
|---|---|
| gene id | G489307 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 25406046 ~ 25406667 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ankyrin repeat and SOCS box protein 6 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU556104 | True | 177 | lncRNA | 0.49 | 2 | 25406046 | 25406667 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525591 | LOC106579906 | coding | downstream | 30564 | 25172861 ~ 25375482 (-) |
| LOC110525589 | LOC106585529 | coding | downstream | 488194 | 24911627 ~ 24917852 (-) |
| piwil1 | piwil1 | coding | downstream | 521041 | 24873223 ~ 24885005 (-) |
| LOC110525585 | LOC106585524 | coding | downstream | 690956 | 24655788 ~ 24715090 (-) |
| ep400 | LOC106579917 | coding | downstream | 771688 | 24597970 ~ 24634358 (-) |
| LOC110525597 | NA | coding | upstream | 42352 | 25449019 ~ 25451212 (-) |
| LOC110525601 | LOC106585539 | coding | upstream | 236565 | 25643232 ~ 25660249 (-) |
| lmx1bb | LOC106585540 | coding | upstream | 297507 | 25704174 ~ 25768796 (-) |
| pbx3b | LOC106585542 | coding | upstream | 572287 | 25978954 ~ 26067633 (-) |
| LOC110525604 | LOC106585543 | coding | upstream | 827885 | 26234552 ~ 26264035 (-) |
| G489302 | NA | non-coding | downstream | 2664 | 25403030 ~ 25403382 (-) |
| G489237 | NA | non-coding | downstream | 18935 | 25386760 ~ 25387111 (-) |
| G489224 | NA | non-coding | downstream | 31982 | 25373805 ~ 25374064 (-) |
| G489212 | NA | non-coding | downstream | 54707 | 25351113 ~ 25351339 (-) |
| G489211 | NA | non-coding | downstream | 54970 | 25350801 ~ 25351076 (-) |
| G489315 | NA | non-coding | upstream | 10223 | 25416890 ~ 25417207 (-) |
| G489316 | NA | non-coding | upstream | 11344 | 25418011 ~ 25418217 (-) |
| G489317 | NA | non-coding | upstream | 12861 | 25419528 ~ 25419782 (-) |
| G489311 | NA | non-coding | upstream | 26847 | 25433514 ~ 25434613 (-) |
| G489328 | NA | non-coding | upstream | 28776 | 25435443 ~ 25435959 (-) |
| G489038 | NA | other | downstream | 299476 | 25106205 ~ 25106570 (-) |
| G488386 | NA | other | downstream | 1052223 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 1688263 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 1820492 | 23582127 ~ 23587892 (-) |
| G489511 | hmcn2 | other | upstream | 90296 | 25496963 ~ 25497489 (-) |
| LOC110525606 | LOC106585545 | other | upstream | 873040 | 26271759 ~ 26283169 (-) |
| tmem230b | LOC106585554 | other | upstream | 1049065 | 26455731 ~ 26457883 (-) |
| LOC110525619 | LOC106585557 | other | upstream | 1140555 | 26481087 ~ 26551627 (-) |
| G491291 | NA | other | upstream | 1418200 | 26824867 ~ 26867158 (-) |
