Item | Value |
---|---|
gene id | G489315 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 25416890 ~ 25417207 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product, partial |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU556112 | True | 318 | lncRNA | 0.42 | 1 | 25416890 | 25417207 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110525591 | LOC106579906 | coding | downstream | 41408 | 25172861 ~ 25375482 (-) |
LOC110525589 | LOC106585529 | coding | downstream | 499038 | 24911627 ~ 24917852 (-) |
piwil1 | piwil1 | coding | downstream | 531885 | 24873223 ~ 24885005 (-) |
LOC110525585 | LOC106585524 | coding | downstream | 701800 | 24655788 ~ 24715090 (-) |
ep400 | LOC106579917 | coding | downstream | 782532 | 24597970 ~ 24634358 (-) |
LOC110525597 | NA | coding | upstream | 31812 | 25449019 ~ 25451212 (-) |
LOC110525601 | LOC106585539 | coding | upstream | 226025 | 25643232 ~ 25660249 (-) |
lmx1bb | LOC106585540 | coding | upstream | 286967 | 25704174 ~ 25768796 (-) |
pbx3b | LOC106585542 | coding | upstream | 561747 | 25978954 ~ 26067633 (-) |
LOC110525604 | LOC106585543 | coding | upstream | 817345 | 26234552 ~ 26264035 (-) |
G489307 | NA | non-coding | downstream | 10223 | 25406046 ~ 25406667 (-) |
G489302 | NA | non-coding | downstream | 13508 | 25403030 ~ 25403382 (-) |
G489237 | NA | non-coding | downstream | 29779 | 25386760 ~ 25387111 (-) |
G489224 | NA | non-coding | downstream | 42826 | 25373805 ~ 25374064 (-) |
G489212 | NA | non-coding | downstream | 65551 | 25351113 ~ 25351339 (-) |
G489316 | NA | non-coding | upstream | 804 | 25418011 ~ 25418217 (-) |
G489317 | NA | non-coding | upstream | 2321 | 25419528 ~ 25419782 (-) |
G489311 | NA | non-coding | upstream | 16307 | 25433514 ~ 25434613 (-) |
G489328 | NA | non-coding | upstream | 18236 | 25435443 ~ 25435959 (-) |
G489329 | LOC106585340 | non-coding | upstream | 20456 | 25437663 ~ 25437968 (-) |
G489038 | NA | other | downstream | 310320 | 25106205 ~ 25106570 (-) |
G488386 | NA | other | downstream | 1063067 | 24353533 ~ 24353823 (-) |
LOC110525552 | LOC106585495 | other | downstream | 1699107 | 23713875 ~ 23717830 (-) |
LOC110525180 | hps4 | other | downstream | 1831336 | 23582127 ~ 23587892 (-) |
G489511 | hmcn2 | other | upstream | 79756 | 25496963 ~ 25497489 (-) |
LOC110525606 | LOC106585545 | other | upstream | 862500 | 26271759 ~ 26283169 (-) |
tmem230b | LOC106585554 | other | upstream | 1038525 | 26455731 ~ 26457883 (-) |
LOC110525619 | LOC106585557 | other | upstream | 1130015 | 26481087 ~ 26551627 (-) |
G491291 | NA | other | upstream | 1407660 | 26824867 ~ 26867158 (-) |