Gene
RNA
| Item | Value |
|---|---|
| gene id | G489737 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 25798342 ~ 25798568 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU556560 | True | 227 | lncRNA | 0.41 | 1 | 25798342 | 25798568 |
25,795,600
25,796,000
25,796,400
25,796,800
25,797,200
25,797,600
25,798,000
25,798,400
25,798,800
25,799,200
25,799,600
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-191c17.2 | LOC106585342 | coding | upstream | 157164 | 25638816 ~ 25641178 (+) |
| LOC110525599 | LOC106585538 | coding | upstream | 173827 | 25596649 ~ 25624515 (+) |
| LOC118965109 | NA | coding | upstream | 189338 | 25608951 ~ 25609004 (+) |
| hmcn2 | hmcn2 | coding | upstream | 240375 | 25496844 ~ 25557967 (+) |
| LOC110525598 | ncs1 | coding | upstream | 305778 | 25461346 ~ 25492564 (+) |
| LOC110525609 | LOC106585547 | coding | downstream | 540602 | 26339170 ~ 26345174 (+) |
| LOC110525610 | LOC106585548 | coding | downstream | 567405 | 26365973 ~ 26382809 (+) |
| LOC110525613 | LOC106585551 | coding | downstream | 592858 | 26391426 ~ 26394660 (+) |
| LOC110525019 | LOC106585553 | coding | downstream | 602304 | 26400872 ~ 26403077 (+) |
| adra1aa | LOC106585343 | coding | downstream | 687846 | 26476668 ~ 26497696 (+) |
| G489431 | NA | non-coding | upstream | 137393 | 25660477 ~ 25660949 (+) |
| G489430 | NA | non-coding | upstream | 138121 | 25659937 ~ 25660221 (+) |
| G489428 | NA | non-coding | upstream | 141676 | 25656443 ~ 25656666 (+) |
| G489255 | NA | non-coding | upstream | 338994 | 25455046 ~ 25459348 (+) |
| G489267 | NA | non-coding | upstream | 363127 | 25434932 ~ 25435215 (+) |
| G489759 | NA | non-coding | downstream | 13583 | 25812151 ~ 25812367 (+) |
| G489783 | NA | non-coding | downstream | 25684 | 25824252 ~ 25824510 (+) |
| G489798 | NA | non-coding | downstream | 36188 | 25834756 ~ 25835073 (+) |
| G489858 | NA | non-coding | downstream | 76343 | 25874911 ~ 25875219 (+) |
| G489863 | NA | non-coding | downstream | 78628 | 25877196 ~ 25877432 (+) |
| G489447 | NA | other | upstream | 114031 | 25683686 ~ 25684311 (+) |
| G488258 | NA | other | upstream | 859070 | 24938769 ~ 24939272 (+) |
| G488078 | NA | other | upstream | 1166946 | 24630969 ~ 24631396 (+) |
| G488049 | NA | other | upstream | 1212029 | 24579961 ~ 24586313 (+) |
| LOC110525642 | bin3 | other | downstream | 1690028 | 27488557 ~ 27543022 (+) |
| LOC110525650 | LOC106585598 | other | downstream | 1981062 | 27738953 ~ 27793944 (+) |
| LOC110525669 | NA | other | downstream | 2573154 | 28370701 ~ 28373267 (+) |
| G493450 | NA | other | downstream | 3190862 | 28989430 ~ 28990734 (+) |
| LOC110525701 | LOC106585276 | other | downstream | 4073444 | 29871980 ~ 29880651 (+) |
