Gene
RNA
| Item | Value |
|---|---|
| gene id | G489837 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 25860489 ~ 25860863 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nucleotide-binding oligomerization domain-containing protein 2 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU556660 | True | 375 | lncRNA | 0.33 | 1 | 25860489 | 25860863 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lmx1bb | LOC106585540 | coding | downstream | 91693 | 25704174 ~ 25768796 (-) |
| LOC110525601 | LOC106585539 | coding | downstream | 200240 | 25643232 ~ 25660249 (-) |
| LOC110525597 | NA | coding | downstream | 409277 | 25449019 ~ 25451212 (-) |
| LOC110525591 | LOC106579906 | coding | downstream | 485007 | 25172861 ~ 25375482 (-) |
| LOC110525589 | LOC106585529 | coding | downstream | 942637 | 24911627 ~ 24917852 (-) |
| pbx3b | LOC106585542 | coding | upstream | 118091 | 25978954 ~ 26067633 (-) |
| LOC110525604 | LOC106585543 | coding | upstream | 373689 | 26234552 ~ 26264035 (-) |
| LOC110525606 | LOC106585545 | coding | upstream | 410896 | 26271759 ~ 26283169 (-) |
| LOC110525607 | LOC106585546 | coding | upstream | 432825 | 26293688 ~ 26317316 (-) |
| LOC110525608 | NA | coding | upstream | 469216 | 26330079 ~ 26334833 (-) |
| G489764 | NA | non-coding | downstream | 46284 | 25813792 ~ 25814205 (-) |
| G489752 | NA | non-coding | downstream | 51400 | 25808825 ~ 25809089 (-) |
| G489731 | NA | non-coding | downstream | 64366 | 25795824 ~ 25796123 (-) |
| G489721 | LOC106569888 | non-coding | downstream | 74547 | 25785599 ~ 25785942 (-) |
| G489706 | NA | non-coding | downstream | 89134 | 25771137 ~ 25771355 (-) |
| G489840 | NA | non-coding | upstream | 1365 | 25862228 ~ 25862447 (-) |
| G489879 | NA | non-coding | upstream | 31939 | 25892802 ~ 25893012 (-) |
| G489880 | NA | non-coding | upstream | 32306 | 25893169 ~ 25893388 (-) |
| G489887 | NA | non-coding | upstream | 40136 | 25900999 ~ 25901218 (-) |
| G489913 | NA | non-coding | upstream | 58243 | 25919106 ~ 25919364 (-) |
| G489511 | hmcn2 | other | downstream | 363000 | 25496963 ~ 25497489 (-) |
| G489038 | NA | other | downstream | 753919 | 25106205 ~ 25106570 (-) |
| LOC110525585 | LOC106585524 | other | downstream | 1151069 | 24655788 ~ 24715090 (-) |
| G488386 | NA | other | downstream | 1506666 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 2142706 | 23713875 ~ 23717830 (-) |
| tmem230b | LOC106585554 | other | upstream | 594869 | 26455731 ~ 26457883 (-) |
| LOC110525619 | LOC106585557 | other | upstream | 686359 | 26481087 ~ 26551627 (-) |
| G491291 | NA | other | upstream | 964004 | 26824867 ~ 26867158 (-) |
| G491539 | NA | other | upstream | 1355744 | 27216607 ~ 27244193 (-) |
