Gene
RNA
| Item | Value |
|---|---|
| gene id | G490145 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 26081305 ~ 26081736 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU556979 | True | 432 | lncRNA | 0.35 | 1 | 26081305 | 26081736 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pbx3b | LOC106585542 | coding | downstream | 13672 | 25978954 ~ 26067633 (-) |
| lmx1bb | LOC106585540 | coding | downstream | 312509 | 25704174 ~ 25768796 (-) |
| LOC110525601 | LOC106585539 | coding | downstream | 421056 | 25643232 ~ 25660249 (-) |
| LOC110525597 | NA | coding | downstream | 630093 | 25449019 ~ 25451212 (-) |
| LOC110525591 | LOC106579906 | coding | downstream | 705823 | 25172861 ~ 25375482 (-) |
| LOC110525604 | LOC106585543 | coding | upstream | 152816 | 26234552 ~ 26264035 (-) |
| LOC110525606 | LOC106585545 | coding | upstream | 190023 | 26271759 ~ 26283169 (-) |
| LOC110525607 | LOC106585546 | coding | upstream | 211952 | 26293688 ~ 26317316 (-) |
| LOC110525608 | NA | coding | upstream | 248343 | 26330079 ~ 26334833 (-) |
| LOC110525611 | LOC106585549 | coding | upstream | 301224 | 26382960 ~ 26391291 (-) |
| G489983 | NA | non-coding | downstream | 112673 | 25968402 ~ 25968632 (-) |
| G489964 | NA | non-coding | downstream | 125140 | 25955946 ~ 25956165 (-) |
| G489913 | NA | non-coding | downstream | 161941 | 25919106 ~ 25919364 (-) |
| G489887 | NA | non-coding | downstream | 180087 | 25900999 ~ 25901218 (-) |
| G489880 | NA | non-coding | downstream | 187917 | 25893169 ~ 25893388 (-) |
| G490431 | NA | non-coding | upstream | 142233 | 26223969 ~ 26224340 (-) |
| G490506 | NA | non-coding | upstream | 273678 | 26355414 ~ 26355872 (-) |
| G490511 | NA | non-coding | upstream | 283469 | 26365205 ~ 26365445 (-) |
| G490513 | LOC106585548 | non-coding | upstream | 287521 | 26369257 ~ 26370378 (-) |
| G490517 | NA | non-coding | upstream | 308044 | 26389780 ~ 26390145 (-) |
| G489511 | hmcn2 | other | downstream | 583816 | 25496963 ~ 25497489 (-) |
| G489038 | NA | other | downstream | 974735 | 25106205 ~ 25106570 (-) |
| LOC110525585 | LOC106585524 | other | downstream | 1371885 | 24655788 ~ 24715090 (-) |
| G488386 | NA | other | downstream | 1727482 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 2363522 | 23713875 ~ 23717830 (-) |
| tmem230b | LOC106585554 | other | upstream | 373996 | 26455731 ~ 26457883 (-) |
| LOC110525619 | LOC106585557 | other | upstream | 465486 | 26481087 ~ 26551627 (-) |
| G491291 | NA | other | upstream | 743131 | 26824867 ~ 26867158 (-) |
| G491539 | NA | other | upstream | 1134871 | 27216607 ~ 27244193 (-) |
