G491291


Basic Information

Item Value
gene id G491291
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 26824867 ~ 26867158 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU558306
gtttgcaactgcacatggggacaaatatcttatttttttgagaaatgtcctctggtctgatgaaacaaaaatagaactgtttagccataatgaccatcgttatgtttggaggaaaaagggggacgcttgcaagccgaagaacaccatcccaaccgtgaagcagcatcatgtggcagcatcatgttttggggtgctttgctaccggagggtctggtgcacttcacaaaatagatggcatcatgaggaagggaaaatatgtggatatattgaagcaacatctcaagacatcagtcaggaagttaaagcttggtagcaaattgttcttccaaatggacaatggcaccaagcatacttccaaagttgtggtaaaatggcttaaggacaacaaaatcaaggtattggagtggcaatcacaaagccatgacctcaatcctatagaacatttgtgggcagaactgaaaaagcgtgtgcgagcaaggagcccttacaaacctgactcagttaccagctctgtcaggaggaatgggccaaaattcacccaacgtattgtgggaagcttgtggaaggctacccgaaacgtttgacccatgttaaacaatttaaaggaaatgctaccaaatactaattgagtatatgtgaacttctgacccactgggaatgtgatgaaagaaataaaagctgaaataaataattcatttcacattcttataacaaagtggtgatcctaactgacctaaaacagggaatttttactaggattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttggccaaggtgtatgtaaacttctgacttcaactgtatttctgaAAAAGTAGTAATAACAGTGACCGTAACACATTTCCCAAGGGACTTTGAAatgttgttgtatatattttatatcactGCTAGGTAAGGGAATGACCAAAGCTTCAATTTTATCTTTTGTCATTATGTGTTAGTATCACACTGAACTGTTAATAAATTCCGGtgcattcttcacaaaaaagCACAGGCAATGACTGCATTTTAATGTTTTATTATGTGATATAGCTAGGTGAAAACCTTTTAATTAGAATCACAATTACTGATCAAAGGCAGGGAATGTGTGGTATGTGATTCACAACTGGTTTCAGCACGCACAGGCTCGGATTCTGTTGTTGTTGATTATATAGTTTACATCTATGGTTGCATCAGCACTGACCTAAAATGACAGTAAATGCCAACCCTTGACGTTTTGGTTCTCTTTGCCCCGTCATGGTCATAGCACATAGTACATGCATAGTAGTCCTTTTTGAAGGAACTGAGATTGTAATCAAAATGGCATTTTCCCCAAATCATTGAATCAGTAGTATTTGTCTAAGATAAAGTCAAATTGAATAACCTTGACTGACTCATAATACTGTGTAGCTatgcattaaatcaaatcaaatgtaatttgtcacatgctttgtaaacaacagggaaatgcttacttcccaacaatacagagagaaaaaaagagaaataatagaaaaatagcacaaggaataaatacacaatgaataacGATAAtttgactatatacacagggtaccaggggtatgaggtatttgaggtagatacagtatgtacatataggtaggaatCTTACATAATTCTGTGATGTAAGCACACTAAGATATGCAAGTACCTCAATGATTTCACATTTTTTAGAGACATGCACTGGATTGAATTCATGTAAATTTGATTTTattgtatatttttatttttaagaacAAACTACTTTATATCTTGACCTCTTGCTTTCTATACAAATCATCTTAATCTATTTCGTTGAAGAAAGTTCTCATttatggtagagagagaatgtTTTTTTGTACAGTTTTTTCAACAGAACATTGTACAAATGGCAGCAACATGCTGAATTGTGAGTACAActtacatttgaaaataagaattgtcAATACTAACTAAAACCCAATAAAAAACAGATGTAGCCAATGAAAAATGTACAAATAATGTTCACCATCAACTGTTAAGCAGGCGAACAATGGCTGGGATGGCGCTGCAACGGAAACACTCAGTCCTGCAGTGGATCAGTTAAGTTGTGGAGTGGGTCAGGTGTACACTAACAGATGATCGTTTAGAGCATATGGTGGATTGCGAAGGATCTTGAGACTCCTTGCGTGTGTAGAGTGATGGTAGGTCCAGATTGGTGCATGTATCGGAGTAGGAGGTGTAGTCTGCCCATGATGATCTGTACTGCTCTTCTCTGGTCCCTCTCAATGGTGTCCCTTGGTTAGCCCCGTATGCCACACTGGAGCAGCATATTCCACCGCTAGTCGGATGTAGGTGGTGAAAACCATTACCAGGTCCAAATATATACATTCTatactttttttaaattcagTCTTATTTTTGTATGCAGTGCTCCCTTTGTCTGCTGAATTGCTCATCCATGCATGTGGTGTATTTCAGAAATTACAGGTTTGATTTATATAGTGCAAGAATGAAGATAATTATTTTCGAAGGGAACTAACCTTTTTGTATGAGTTTTTCTAACAATGATCAGAACAGATATTTGTAAAGAGATTTATAGCTATGTACTAGCATGAAGAGATGTAATATACATTTTTGACCAATAAAACTTGTAAAGCCGACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU558306 True 2656 TUCP 0.37 2 26824867 26867158

Neighbor

gene id symbol gene type direction distance location
LOC110525624 LOC100380864 coding downstream 84224 26738279 ~ 26740643 (-)
LOC110525623 cenpe coding downstream 91923 26726252 ~ 26732944 (-)
LOC110525622 NA coding downstream 100841 26713456 ~ 26724026 (-)
LOC110525621 LOC106585565 coding downstream 113469 26608848 ~ 26711398 (-)
LOC110525620 LOC106585558 coding downstream 260537 26553538 ~ 26564330 (-)
LOC118965120 NA coding upstream 10164 26877322 ~ 26877454 (-)
LOC110525629 LOC106585566 coding upstream 16705 26883863 ~ 26888305 (-)
LOC110525021 nkx31 coding upstream 383900 27251058 ~ 27252377 (-)
LOC110525638 LOC106585585 coding upstream 403663 27270821 ~ 27278551 (-)
LOC110525639 LOC106579858 coding upstream 475787 27342945 ~ 27351891 (-)
G491027 NA non-coding downstream 1710 26822893 ~ 26823157 (-)
G490982 NA non-coding downstream 6242 26755780 ~ 26818625 (-)
G490978 NA non-coding downstream 74304 26746242 ~ 26750563 (-)
G490963 NA non-coding downstream 95383 26707102 ~ 26729484 (-)
G491417 LOC106585572 non-coding upstream 171886 27039044 ~ 27039874 (-)
G491475 LOC106585563 non-coding upstream 242216 27109374 ~ 27110138 (-)
G491435 LOC106585567 non-coding upstream 270998 27138156 ~ 27140754 (-)
G491492 NA non-coding upstream 277721 27144879 ~ 27145306 (-)
G491497 NA non-coding upstream 286548 27153706 ~ 27192358 (-)
LOC110525619 LOC106585557 other downstream 273240 26481087 ~ 26551627 (-)
tmem230b LOC106585554 other downstream 367026 26455731 ~ 26457883 (-)
LOC110525606 LOC106585545 other downstream 541698 26271759 ~ 26283169 (-)
G489511 hmcn2 other downstream 1327378 25496963 ~ 25497489 (-)
G489038 NA other downstream 1718297 25106205 ~ 25106570 (-)
G491539 NA other upstream 349449 27216607 ~ 27244193 (-)
LOC110525653 NA other upstream 867838 27734995 ~ 27737024 (-)
LOC110525655 LOC106585601 other upstream 960073 27827231 ~ 27885634 (-)
G494389 LOC106585296 other upstream 2544057 29411215 ~ 29415314 (-)
LOC110525681 hectd4 other upstream 2611497 29411204 ~ 29483533 (-)

Expression


Co-expression Network