Gene
RNA
| Item | Value |
|---|---|
| gene id | G491475 |
| gene name | LOC106585563 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 27109374 ~ 27110138 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| fibroblast growth factor receptor 1-A-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU558505 | True | 346 | lncRNA | 0.59 | 2 | 27109374 | 27110138 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525629 | LOC106585566 | coding | downstream | 221069 | 26883863 ~ 26888305 (-) |
| LOC118965120 | NA | coding | downstream | 231920 | 26877322 ~ 26877454 (-) |
| LOC110525627 | LOC106585561 | coding | downstream | 233331 | 26828158 ~ 26876043 (-) |
| LOC110525624 | LOC100380864 | coding | downstream | 368731 | 26738279 ~ 26740643 (-) |
| LOC110525623 | cenpe | coding | downstream | 376430 | 26726252 ~ 26732944 (-) |
| LOC110525021 | nkx31 | coding | upstream | 140920 | 27251058 ~ 27252377 (-) |
| LOC110525638 | LOC106585585 | coding | upstream | 160683 | 27270821 ~ 27278551 (-) |
| LOC110525639 | LOC106579858 | coding | upstream | 232807 | 27342945 ~ 27351891 (-) |
| LOC110525643 | LOC106585590 | coding | upstream | 435470 | 27545608 ~ 27560556 (-) |
| LOC110525644 | LOC106585592 | coding | upstream | 451419 | 27561557 ~ 27578521 (-) |
| G491417 | LOC106585572 | non-coding | downstream | 69500 | 27039044 ~ 27039874 (-) |
| G491027 | NA | non-coding | downstream | 286217 | 26822893 ~ 26823157 (-) |
| G490982 | NA | non-coding | downstream | 290749 | 26755780 ~ 26818625 (-) |
| G490978 | NA | non-coding | downstream | 358811 | 26746242 ~ 26750563 (-) |
| G490963 | NA | non-coding | downstream | 379890 | 26707102 ~ 26729484 (-) |
| G491435 | LOC106585567 | non-coding | upstream | 28018 | 27138156 ~ 27140754 (-) |
| G491492 | NA | non-coding | upstream | 34741 | 27144879 ~ 27145306 (-) |
| G491497 | NA | non-coding | upstream | 43568 | 27153706 ~ 27192358 (-) |
| G491598 | NA | non-coding | upstream | 206740 | 27316878 ~ 27317100 (-) |
| G491602 | NA | non-coding | upstream | 209991 | 27320129 ~ 27320361 (-) |
| G491291 | NA | other | downstream | 242216 | 26824867 ~ 26867158 (-) |
| LOC110525619 | LOC106585557 | other | downstream | 557747 | 26481087 ~ 26551627 (-) |
| tmem230b | LOC106585554 | other | downstream | 651533 | 26455731 ~ 26457883 (-) |
| LOC110525606 | LOC106585545 | other | downstream | 826205 | 26271759 ~ 26283169 (-) |
| G489511 | hmcn2 | other | downstream | 1611885 | 25496963 ~ 25497489 (-) |
| G491539 | NA | other | upstream | 106469 | 27216607 ~ 27244193 (-) |
| LOC110525653 | NA | other | upstream | 624858 | 27734995 ~ 27737024 (-) |
| LOC110525655 | LOC106585601 | other | upstream | 717093 | 27827231 ~ 27885634 (-) |
| G494389 | LOC106585296 | other | upstream | 2301077 | 29411215 ~ 29415314 (-) |
| LOC110525681 | hectd4 | other | upstream | 2368517 | 29411204 ~ 29483533 (-) |
