Gene
RNA
| Item | Value |
|---|---|
| gene id | G492188 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 27712370 ~ 27712609 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: neurotrophin receptor-interacting factor 1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU559272 | True | 240 | lncRNA | 0.40 | 1 | 27712370 | 27712609 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525648 | LOC106585594 | coding | downstream | 6660 | 27652785 ~ 27705710 (-) |
| LOC110525644 | LOC106585592 | coding | downstream | 133849 | 27561557 ~ 27578521 (-) |
| LOC110525643 | LOC106585590 | coding | downstream | 151814 | 27545608 ~ 27560556 (-) |
| LOC110525639 | LOC106579858 | coding | downstream | 360479 | 27342945 ~ 27351891 (-) |
| LOC110525638 | LOC106585585 | coding | downstream | 433819 | 27270821 ~ 27278551 (-) |
| LOC110525649 | LOC106585595 | coding | upstream | 1522 | 27714131 ~ 27724003 (-) |
| LOC110525653 | NA | coding | upstream | 22386 | 27734995 ~ 27737024 (-) |
| LOC110525654 | LOC106585600 | coding | upstream | 85661 | 27798270 ~ 27812882 (-) |
| LOC118965072 | LOC106579843 | coding | upstream | 104967 | 27817576 ~ 27820202 (-) |
| LOC110525655 | LOC106585601 | coding | upstream | 119643 | 27827231 ~ 27885634 (-) |
| G492157 | NA | non-coding | downstream | 66662 | 27645075 ~ 27645708 (-) |
| G492146 | LOC106585319 | non-coding | downstream | 83493 | 27627891 ~ 27628877 (-) |
| G492145 | NA | non-coding | downstream | 84724 | 27627280 ~ 27627646 (-) |
| G492127 | NA | non-coding | downstream | 105366 | 27606685 ~ 27607004 (-) |
| G492122 | NA | non-coding | downstream | 110728 | 27601345 ~ 27601642 (-) |
| G492134 | NA | non-coding | upstream | 482 | 27713091 ~ 27713366 (-) |
| G492192 | NA | non-coding | upstream | 14212 | 27726821 ~ 27727192 (-) |
| G492195 | NA | non-coding | upstream | 16448 | 27729057 ~ 27729291 (-) |
| G492229 | NA | non-coding | upstream | 57989 | 27770598 ~ 27770807 (-) |
| G492235 | NA | non-coding | upstream | 62989 | 27775598 ~ 27775805 (-) |
| G491539 | NA | other | downstream | 468177 | 27216607 ~ 27244193 (-) |
| G491291 | NA | other | downstream | 845212 | 26824867 ~ 26867158 (-) |
| LOC110525619 | LOC106585557 | other | downstream | 1160743 | 26481087 ~ 26551627 (-) |
| tmem230b | LOC106585554 | other | downstream | 1254529 | 26455731 ~ 26457883 (-) |
| LOC110525606 | LOC106585545 | other | downstream | 1429201 | 26271759 ~ 26283169 (-) |
| G494389 | LOC106585296 | other | upstream | 1698606 | 29411215 ~ 29415314 (-) |
| LOC110525681 | hectd4 | other | upstream | 1766046 | 29411204 ~ 29483533 (-) |
| LOC110525684 | LOC106585295 | other | upstream | 1789644 | 29502192 ~ 29520980 (-) |
