G492284



Basic Information


Item Value
gene id G492284
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 27896282 ~ 27896518 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU559388
GCCATAAGTTAAATCACATTAACGTTTTAGTATTCTCTTCGAAAAATGTATGACGACAAGATGTATGAGAACAGAAACTTAACGTAGCACAGATACAGTAGCACAGATACAAtgttagccatgaagtgctttgaaaggccagtcgtggctcacatcaacaccatcatcccagaaaccatagaccgactccaattcgcataccgccacaacagatccacagatgacacaatctctttT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU559388 True 237 lncRNA 0.41 1 27896282 27896518

Neighbor


gene id symbol gene type direction distance location
LOC110525655 LOC106585601 coding downstream 29002 27827231 ~ 27885634 (-)
LOC118965072 LOC106579843 coding downstream 76080 27817576 ~ 27820202 (-)
LOC110525654 LOC106585600 coding downstream 83400 27798270 ~ 27812882 (-)
LOC110525653 NA coding downstream 159258 27734995 ~ 27737024 (-)
LOC110525649 LOC106585595 coding downstream 172279 27714131 ~ 27724003 (-)
LOC110525658 LOC100195761 coding upstream 131658 28028176 ~ 28044300 (-)
LOC110525659 LOC106585607 coding upstream 148287 28044805 ~ 28105169 (-)
LOC110525660 pdli2 coding upstream 214450 28110968 ~ 28180720 (-)
LOC110525662 LOC106585608 coding upstream 296990 28193508 ~ 28247237 (-)
LOC110525663 lincr coding upstream 359970 28256488 ~ 28259851 (-)
G492279 NA non-coding downstream 3182 27892868 ~ 27893100 (-)
G492208 NA non-coding downstream 102536 27791875 ~ 27793746 (-)
G492207 NA non-coding downstream 119335 27776556 ~ 27776947 (-)
G492235 NA non-coding downstream 120477 27775598 ~ 27775805 (-)
G492289 NA non-coding upstream 13048 27909566 ~ 27909770 (-)
G492295 NA non-coding upstream 17757 27914275 ~ 27914474 (-)
G492297 NA non-coding upstream 18529 27915047 ~ 27915297 (-)
G492298 NA non-coding upstream 18989 27915507 ~ 27915735 (-)
G492526 NA non-coding upstream 170019 28066537 ~ 28066746 (-)
G491539 NA other downstream 652089 27216607 ~ 27244193 (-)
G491291 NA other downstream 1029124 26824867 ~ 26867158 (-)
LOC110525619 LOC106585557 other downstream 1344655 26481087 ~ 26551627 (-)
G494389 LOC106585296 other upstream 1514697 29411215 ~ 29415314 (-)
LOC110525681 hectd4 other upstream 1582137 29411204 ~ 29483533 (-)
LOC110525684 LOC106585295 other upstream 1605735 29502192 ~ 29520980 (-)
G494542 NA other upstream 1778805 29675323 ~ 29675573 (-)
LOC110525714 LOC106585251 other upstream 2630168 30526034 ~ 30527686 (-)

Expression



Co-expression Network