G492412


Basic Information

Item Value
gene id G492412
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 28092635 ~ 28142454 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU559529
aaaagctagccttaggatgtttttgtgctggtcaaggtcaGTCAAGTCTgttctacattttttgaacggggcatgcttatttaagatggtgaggaaagcacttttgaagagcaaccaggcatcctctactgacgggatgaggtcaatatccttccaggatacccgggccaggtcgattagaaaggcctgctcacagaagtgttttagggagcgtttgacagtgatgaggggtggtcgtttgactgcggctccgtagcggatacaggcaatgaggcagtgatcgctgagatcctggttgaagacagcggaggtgtatttggagggccagttggtcaggatgacgtcaatgagggtgcccttgtttacagagttagggttgtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU559529 True 382 lncRNA 0.50 3 28092635 28142454

Neighbor

gene id symbol gene type direction distance location
LOC110525656 LOC106585605 coding upstream 67273 28019895 ~ 28025362 (+)
LOC100136655 LOC100136655 coding upstream 69217 27960062 ~ 28023418 (+)
LOC110525650 LOC106585598 coding upstream 298861 27738953 ~ 27793944 (+)
LOC110525647 disp3 coding upstream 463938 27616687 ~ 27628697 (+)
LOC110526216 LOC102300151 coding upstream 479018 27603601 ~ 27613617 (+)
LOC110525664 LOC106585346 coding downstream 120342 28262778 ~ 28266718 (+)
LOC110525669 NA coding downstream 228247 28370701 ~ 28373267 (+)
LOC110525670 LOC106585612 coding downstream 249933 28392387 ~ 28400323 (+)
LOC110526333 LOC106585616 coding downstream 345359 28487813 ~ 28535585 (+)
tgoln2 LOC106585618 coding downstream 400567 28543021 ~ 28552161 (+)
G492398 NA non-coding upstream 17738 28074628 ~ 28074897 (+)
G492395 NA non-coding upstream 23837 28068560 ~ 28068798 (+)
G492394 NA non-coding upstream 25996 28066089 ~ 28066639 (+)
G492385 NA non-coding upstream 39721 28052328 ~ 28052914 (+)
G492384 NA non-coding upstream 40473 28051149 ~ 28052162 (+)
G492452 NA non-coding downstream 7510 28149964 ~ 28151308 (+)
G492606 NA non-coding downstream 51131 28193585 ~ 28195219 (+)
G492653 NA non-coding downstream 134436 28276890 ~ 28287516 (+)
G492652 NA non-coding downstream 139297 28281751 ~ 28289143 (+)
LOC110525642 bin3 other upstream 549640 27488557 ~ 27543022 (+)
G489447 NA other upstream 2408324 25683686 ~ 25684311 (+)
si:dkey-191c17.2 LOC106585342 other upstream 2452943 25638816 ~ 25641178 (+)
G488258 NA other upstream 3153363 24938769 ~ 24939272 (+)
G493450 NA other downstream 846976 28989430 ~ 28990734 (+)
LOC110525701 LOC106585276 other downstream 1729558 29871980 ~ 29880651 (+)
G494065 NA other downstream 1942130 30084584 ~ 30129769 (+)
G494946 NA other downstream 2179568 30322022 ~ 30344847 (+)

Expression


Co-expression Network