Gene
RNA
| Item | Value |
|---|---|
| gene id | G493053 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 28539576 ~ 28539825 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tc3 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU560226 | True | 250 | lncRNA | 0.44 | 1 | 28539576 | 28539825 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ube2d4 | UBE2D4 | coding | downstream | 71711 | 28455590 ~ 28467865 (-) |
| dbnlb | dbnl | coding | downstream | 91393 | 28430078 ~ 28448183 (-) |
| arid5a | LOC106585613 | coding | downstream | 114351 | 28414737 ~ 28425225 (-) |
| LOC110525671 | sld5 | coding | downstream | 125103 | 28403084 ~ 28414473 (-) |
| LOC110525668 | LOC106585611 | coding | downstream | 169560 | 28356038 ~ 28370016 (-) |
| zgc:153044 | dus18 | coding | upstream | 12439 | 28552264 ~ 28556013 (-) |
| LOC110525678 | LOC106585621 | coding | upstream | 449582 | 28989407 ~ 29010716 (-) |
| LOC110525679 | LOC106585622 | coding | upstream | 483383 | 29023208 ~ 29070012 (-) |
| LOC110526490 | LOC106580375 | coding | upstream | 530891 | 29070716 ~ 29398888 (-) |
| LOC110525681 | hectd4 | coding | upstream | 871379 | 29411204 ~ 29483533 (-) |
| G493040 | NA | non-coding | downstream | 23658 | 28514915 ~ 28515918 (-) |
| G493001 | NA | non-coding | downstream | 69331 | 28469988 ~ 28470245 (-) |
| G492994 | NA | non-coding | downstream | 87789 | 28451490 ~ 28451787 (-) |
| G492986 | NA | non-coding | downstream | 113607 | 28425764 ~ 28425969 (-) |
| G493062 | NA | non-coding | upstream | 24554 | 28564379 ~ 28565133 (-) |
| G493036 | NA | non-coding | upstream | 25375 | 28565200 ~ 28567909 (-) |
| G493037 | NA | non-coding | upstream | 30412 | 28570237 ~ 28570553 (-) |
| G493030 | NA | non-coding | upstream | 33303 | 28573128 ~ 28573835 (-) |
| G493063 | NA | non-coding | upstream | 35248 | 28575073 ~ 28575355 (-) |
| LOC110525655 | LOC106585601 | other | downstream | 704274 | 27827231 ~ 27885634 (-) |
| LOC110525653 | NA | other | downstream | 802598 | 27734995 ~ 27737024 (-) |
| G491539 | NA | other | downstream | 1295383 | 27216607 ~ 27244193 (-) |
| G491291 | NA | other | downstream | 1672418 | 26824867 ~ 26867158 (-) |
| LOC110525619 | LOC106585557 | other | downstream | 1987949 | 26481087 ~ 26551627 (-) |
| G494389 | LOC106585296 | other | upstream | 871390 | 29411215 ~ 29415314 (-) |
| LOC110525684 | LOC106585295 | other | upstream | 962428 | 29502192 ~ 29520980 (-) |
| G494542 | NA | other | upstream | 1135498 | 29675323 ~ 29675573 (-) |
| LOC110525714 | LOC106585251 | other | upstream | 1986861 | 30526034 ~ 30527686 (-) |
