G493185


Basic Information

Item Value
gene id G493185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 28724357 ~ 28724817 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU560365
AGCCACAGGACAGGGTAAGTTCAGCAGTCTAGAAATGTCTGTACTGAATGAAGTATTACCACTATCTTTTAAAAACCATGTCCAATTTATTTGCctaacacaattcaacacaatcacaaacacttttttgtcttttaataatttaagcatcttttaacacaggcttaacatCTTATAAACTAATTGTTCTTTTTAAATAACACTTTTAACATAAGacaggccctgttgttacctcatattccagtgataatgccttgcattacacctgggaagaaaacacacTTTGCTCAACATGCCTTTGACTCAACCATTGGCTCATCTTACCCCATGATCATTGACTCAACTTGCatcaaggcaaacattttgactatattagcccacacagctacaaggatgcgctttcatgctaggtttaggacctcatattcaagcttatagagaccccaactgatgtataggaC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU560365 True 461 lncRNA 0.37 1 28724357 28724817

Neighbor

gene id symbol gene type direction distance location
zgc:153044 dus18 coding downstream 168344 28552264 ~ 28556013 (-)
ube2d4 UBE2D4 coding downstream 256492 28455590 ~ 28467865 (-)
dbnlb dbnl coding downstream 276174 28430078 ~ 28448183 (-)
arid5a LOC106585613 coding downstream 299132 28414737 ~ 28425225 (-)
LOC110525671 sld5 coding downstream 309884 28403084 ~ 28414473 (-)
LOC110525678 LOC106585621 coding upstream 264590 28989407 ~ 29010716 (-)
LOC110525679 LOC106585622 coding upstream 298391 29023208 ~ 29070012 (-)
LOC110526490 LOC106580375 coding upstream 345899 29070716 ~ 29398888 (-)
LOC110525681 hectd4 coding upstream 686387 29411204 ~ 29483533 (-)
LOC110525683 NA coding upstream 689944 29414761 ~ 29415342 (-)
G493116 NA non-coding downstream 59472 28664527 ~ 28664885 (-)
G493100 NA non-coding downstream 78584 28645501 ~ 28645773 (-)
G493099 NA non-coding downstream 80705 28643354 ~ 28643652 (-)
G493098 NA non-coding downstream 83777 28640221 ~ 28640580 (-)
G493096 NA non-coding downstream 84558 28639543 ~ 28639799 (-)
G493234 NA non-coding upstream 46273 28771090 ~ 28771341 (-)
G493251 NA non-coding upstream 59059 28783876 ~ 28784129 (-)
G493259 NA non-coding upstream 66360 28791177 ~ 28791497 (-)
G493300 NA non-coding upstream 99558 28824375 ~ 28824592 (-)
G493313 NA non-coding upstream 108494 28833311 ~ 28833543 (-)
LOC110525655 LOC106585601 other downstream 889055 27827231 ~ 27885634 (-)
LOC110525653 NA other downstream 987379 27734995 ~ 27737024 (-)
G491539 NA other downstream 1480164 27216607 ~ 27244193 (-)
G491291 NA other downstream 1857199 26824867 ~ 26867158 (-)
LOC110525619 LOC106585557 other downstream 2172730 26481087 ~ 26551627 (-)
G494389 LOC106585296 other upstream 686398 29411215 ~ 29415314 (-)
LOC110525684 LOC106585295 other upstream 777436 29502192 ~ 29520980 (-)
G494542 NA other upstream 950506 29675323 ~ 29675573 (-)
LOC110525714 LOC106585251 other upstream 1801869 30526034 ~ 30527686 (-)

Expression


Co-expression Network