G494122


Basic Information

Item Value
gene id G494122
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 28970906 ~ 28971211 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU561400
ctctctctctctctctctctctctctctctctctctctctctctctctctctctctctgtctctctctctctctctctctctctctctctctctctctgtctctctctctctctgtctctctgtctctctctctctctctctctctctctctgtctctctctctctctctctctctctctgtctctctctctctctgtctctctgtctctctctctctctctctttctctctctctctttctctcaccctctctctctctcgctctctctctctctctctctctttctctcaccctctctctctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU561400 True 306 lncRNA 0.50 1 28970906 28971211

Neighbor

gene id symbol gene type direction distance location
zgc:153044 dus18 coding downstream 414893 28552264 ~ 28556013 (-)
ube2d4 UBE2D4 coding downstream 503041 28455590 ~ 28467865 (-)
dbnlb dbnl coding downstream 522723 28430078 ~ 28448183 (-)
arid5a LOC106585613 coding downstream 545681 28414737 ~ 28425225 (-)
LOC110525671 sld5 coding downstream 556433 28403084 ~ 28414473 (-)
LOC110525678 LOC106585621 coding upstream 18196 28989407 ~ 29010716 (-)
LOC110525679 LOC106585622 coding upstream 51997 29023208 ~ 29070012 (-)
LOC110526490 LOC106580375 coding upstream 99505 29070716 ~ 29398888 (-)
LOC110525681 hectd4 coding upstream 439993 29411204 ~ 29483533 (-)
LOC110525683 NA coding upstream 443550 29414761 ~ 29415342 (-)
G493419 NA non-coding downstream 21769 28948864 ~ 28949137 (-)
G493411 NA non-coding downstream 32428 28938251 ~ 28938478 (-)
G493313 NA non-coding downstream 137363 28833311 ~ 28833543 (-)
G493300 NA non-coding downstream 146314 28824375 ~ 28824592 (-)
G493259 NA non-coding downstream 179409 28791177 ~ 28791497 (-)
G494130 NA non-coding upstream 14500 28985711 ~ 28985927 (-)
G494154 NA non-coding upstream 69200 29040411 ~ 29040803 (-)
G494205 NA non-coding upstream 178528 29149739 ~ 29149956 (-)
LOC110525655 LOC106585601 other downstream 1135604 27827231 ~ 27885634 (-)
LOC110525653 NA other downstream 1233928 27734995 ~ 27737024 (-)
G491539 NA other downstream 1726713 27216607 ~ 27244193 (-)
G491291 NA other downstream 2103748 26824867 ~ 26867158 (-)
LOC110525619 LOC106585557 other downstream 2419279 26481087 ~ 26551627 (-)
G494389 LOC106585296 other upstream 440004 29411215 ~ 29415314 (-)
LOC110525684 LOC106585295 other upstream 531042 29502192 ~ 29520980 (-)
G494542 NA other upstream 704112 29675323 ~ 29675573 (-)
LOC110525714 LOC106585251 other upstream 1555475 30526034 ~ 30527686 (-)

Expression


Co-expression Network