G494289



Basic Information


Item Value
gene id G494289
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 29280029 ~ 29280248 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU561586
ggtccatatatctctaatatggtccaacattgggcaggaggttaggaagtgcagctcagttttctctctcgctctgcctctctctctgtatctcggtctctctctctctctctctctctctctgtatctcagtctctctctctctctctctctctgtctctctctctctctctctctctctcagtatctcagtctctctctctctctctctctctctctg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU561586 True 220 lncRNA 0.49 1 29280029 29280248

Neighbor


gene id symbol gene type direction distance location
LOC110525679 LOC106585622 coding downstream 210017 29023208 ~ 29070012 (-)
LOC110525678 LOC106585621 coding downstream 269313 28989407 ~ 29010716 (-)
zgc:153044 dus18 coding downstream 724016 28552264 ~ 28556013 (-)
ube2d4 UBE2D4 coding downstream 812164 28455590 ~ 28467865 (-)
dbnlb dbnl coding downstream 831846 28430078 ~ 28448183 (-)
LOC110525681 hectd4 coding upstream 130956 29411204 ~ 29483533 (-)
LOC110525683 NA coding upstream 134513 29414761 ~ 29415342 (-)
LOC110525684 LOC106585295 coding upstream 221944 29502192 ~ 29520980 (-)
LOC110525685 LOC106585294 coding upstream 246535 29526783 ~ 29575598 (-)
LOC110526522 LOC106585290 coding upstream 315168 29595416 ~ 29596809 (-)
G494288 NA non-coding downstream 102 29279724 ~ 29279927 (-)
G494285 NA non-coding downstream 2118 29277691 ~ 29277911 (-)
G494231 NA non-coding downstream 79463 29200340 ~ 29200566 (-)
G494228 NA non-coding downstream 81831 29197860 ~ 29198198 (-)
G494212 NA non-coding downstream 115220 29164607 ~ 29164809 (-)
G494338 LOC105030512 non-coding upstream 70040 29350288 ~ 29350607 (-)
G494356 NA non-coding upstream 87906 29368154 ~ 29368433 (-)
G494357 NA non-coding upstream 88727 29368975 ~ 29369223 (-)
G494359 NA non-coding upstream 93775 29374023 ~ 29374278 (-)
G494376 NA non-coding upstream 113456 29393704 ~ 29393907 (-)
LOC110525655 LOC106585601 other downstream 1444727 27827231 ~ 27885634 (-)
LOC110525653 NA other downstream 1543051 27734995 ~ 27737024 (-)
G491539 NA other downstream 2035836 27216607 ~ 27244193 (-)
G491291 NA other downstream 2412871 26824867 ~ 26867158 (-)
LOC110525619 LOC106585557 other downstream 2728402 26481087 ~ 26551627 (-)
G494389 LOC106585296 other upstream 130967 29411215 ~ 29415314 (-)
G494542 NA other upstream 395075 29675323 ~ 29675573 (-)
LOC110525714 LOC106585251 other upstream 1246438 30526034 ~ 30527686 (-)

Expression



Co-expression Network