Gene
RNA
| Item | Value |
|---|---|
| gene id | G494404 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 29463891 ~ 29464214 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU561709 | True | 324 | lncRNA | 0.48 | 1 | 29463891 | 29464214 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525683 | NA | coding | downstream | 48549 | 29414761 ~ 29415342 (-) |
| LOC110526490 | LOC106580375 | coding | downstream | 65003 | 29070716 ~ 29398888 (-) |
| LOC110525679 | LOC106585622 | coding | downstream | 393879 | 29023208 ~ 29070012 (-) |
| LOC110525678 | LOC106585621 | coding | downstream | 453175 | 28989407 ~ 29010716 (-) |
| zgc:153044 | dus18 | coding | downstream | 907878 | 28552264 ~ 28556013 (-) |
| LOC110525684 | LOC106585295 | coding | upstream | 37978 | 29502192 ~ 29520980 (-) |
| LOC110525685 | LOC106585294 | coding | upstream | 62569 | 29526783 ~ 29575598 (-) |
| LOC110526522 | LOC106585290 | coding | upstream | 131202 | 29595416 ~ 29596809 (-) |
| LOC110525693 | NA | coding | upstream | 185989 | 29650203 ~ 29654088 (-) |
| LOC110525694 | LOC106585282 | coding | upstream | 241845 | 29706059 ~ 29754403 (-) |
| G494402 | NA | non-coding | downstream | 4309 | 29459281 ~ 29459582 (-) |
| G494401 | NA | non-coding | downstream | 8323 | 29455359 ~ 29455568 (-) |
| LOC110525681 | hectd4 | non-coding | downstream | 10875 | 29411204 ~ 29483533 (-) |
| G494378 | NA | non-coding | downstream | 56175 | 29399840 ~ 29407716 (-) |
| G494376 | NA | non-coding | downstream | 69984 | 29393704 ~ 29393907 (-) |
| G494496 | NA | non-coding | upstream | 146609 | 29610823 ~ 29611022 (-) |
| G494497 | psmd9 | non-coding | upstream | 152359 | 29616573 ~ 29623212 (-) |
| G494503 | NA | non-coding | upstream | 160826 | 29625040 ~ 29625323 (-) |
| G494504 | NA | non-coding | upstream | 161246 | 29625460 ~ 29625716 (-) |
| G494505 | NA | non-coding | upstream | 162278 | 29626492 ~ 29626703 (-) |
| G494389 | LOC106585296 | other | downstream | 48577 | 29411215 ~ 29415314 (-) |
| LOC110525655 | LOC106585601 | other | downstream | 1628589 | 27827231 ~ 27885634 (-) |
| LOC110525653 | NA | other | downstream | 1726913 | 27734995 ~ 27737024 (-) |
| G491539 | NA | other | downstream | 2219698 | 27216607 ~ 27244193 (-) |
| G491291 | NA | other | downstream | 2596733 | 26824867 ~ 26867158 (-) |
| G494542 | NA | other | upstream | 211109 | 29675323 ~ 29675573 (-) |
| LOC110525714 | LOC106585251 | other | upstream | 1062472 | 30526034 ~ 30527686 (-) |
| G495554 | NA | other | upstream | 1081188 | 30545402 ~ 30549450 (-) |
