Gene
RNA
| Item | Value |
|---|---|
| gene id | G494496 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 29610823 ~ 29611022 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU561810 | True | 200 | lncRNA | 0.46 | 1 | 29610823 | 29611022 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526522 | LOC106585290 | coding | downstream | 14014 | 29595416 ~ 29596809 (-) |
| LOC110525685 | LOC106585294 | coding | downstream | 35225 | 29526783 ~ 29575598 (-) |
| LOC110525684 | LOC106585295 | coding | downstream | 89843 | 29502192 ~ 29520980 (-) |
| LOC110525681 | hectd4 | coding | downstream | 127290 | 29411204 ~ 29483533 (-) |
| LOC110525683 | NA | coding | downstream | 195481 | 29414761 ~ 29415342 (-) |
| LOC110525693 | NA | coding | upstream | 39181 | 29650203 ~ 29654088 (-) |
| LOC110525694 | LOC106585282 | coding | upstream | 95037 | 29706059 ~ 29754403 (-) |
| LOC110525696 | LOC106585281 | coding | upstream | 143880 | 29754902 ~ 29760372 (-) |
| LOC110525697 | rsrc2 | coding | upstream | 158902 | 29769924 ~ 29786928 (-) |
| LOC118965073 | NA | coding | upstream | 187487 | 29798141 ~ 29811783 (-) |
| G494404 | NA | non-coding | downstream | 146609 | 29463891 ~ 29464214 (-) |
| G494402 | NA | non-coding | downstream | 151241 | 29459281 ~ 29459582 (-) |
| G494401 | NA | non-coding | downstream | 155255 | 29455359 ~ 29455568 (-) |
| G494378 | NA | non-coding | downstream | 203107 | 29399840 ~ 29407716 (-) |
| G494497 | psmd9 | non-coding | upstream | 5551 | 29616573 ~ 29623212 (-) |
| G494503 | NA | non-coding | upstream | 14018 | 29625040 ~ 29625323 (-) |
| G494504 | NA | non-coding | upstream | 14438 | 29625460 ~ 29625716 (-) |
| G494505 | NA | non-coding | upstream | 15470 | 29626492 ~ 29626703 (-) |
| G494506 | NA | non-coding | upstream | 16956 | 29627978 ~ 29628335 (-) |
| G494389 | LOC106585296 | other | downstream | 195509 | 29411215 ~ 29415314 (-) |
| LOC110525655 | LOC106585601 | other | downstream | 1775521 | 27827231 ~ 27885634 (-) |
| LOC110525653 | NA | other | downstream | 1873845 | 27734995 ~ 27737024 (-) |
| G494542 | NA | other | upstream | 64301 | 29675323 ~ 29675573 (-) |
| LOC110525714 | LOC106585251 | other | upstream | 915664 | 30526034 ~ 30527686 (-) |
| G495554 | NA | other | upstream | 934380 | 30545402 ~ 30549450 (-) |
| G495560 | NA | other | upstream | 964096 | 30575118 ~ 30575573 (-) |
| G496772 | NA | other | upstream | 2050371 | 31661393 ~ 31661618 (-) |
