G494504



Basic Information


Item Value
gene id G494504
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 29625460 ~ 29625716 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU561823
agaagtttggaaccaccaagactcttccaagagctggctgccctgccaaactgagcaattggagaagggccttggtcaaggaggtgaccatgaacccaatggtcactctgacagagctctagagttcctctgtggagatgggagaaccttccagaaggacaaccatctttgcagcactcccctaatcaggcctttatggtagagtggccagatggaagccactcctcagtaaaaggcacttgacagcccgTTTGGAG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU561823 True 257 lncRNA 0.52 1 29625460 29625716

Neighbor


gene id symbol gene type direction distance location
LOC110526522 LOC106585290 coding downstream 28651 29595416 ~ 29596809 (-)
LOC110525685 LOC106585294 coding downstream 49862 29526783 ~ 29575598 (-)
LOC110525684 LOC106585295 coding downstream 104480 29502192 ~ 29520980 (-)
LOC110525681 hectd4 coding downstream 141927 29411204 ~ 29483533 (-)
LOC110525693 NA coding upstream 24487 29650203 ~ 29654088 (-)
LOC110525694 LOC106585282 coding upstream 80343 29706059 ~ 29754403 (-)
LOC110525696 LOC106585281 coding upstream 129186 29754902 ~ 29760372 (-)
LOC110525697 rsrc2 coding upstream 144208 29769924 ~ 29786928 (-)
LOC118965073 NA coding upstream 172793 29798141 ~ 29811783 (-)
G494503 NA non-coding downstream 137 29625040 ~ 29625323 (-)
G494497 psmd9 non-coding downstream 2248 29616573 ~ 29623212 (-)
G494496 NA non-coding downstream 14438 29610823 ~ 29611022 (-)
G494404 NA non-coding downstream 161246 29463891 ~ 29464214 (-)
G494402 NA non-coding downstream 165878 29459281 ~ 29459582 (-)
G494505 NA non-coding upstream 776 29626492 ~ 29626703 (-)
G494506 NA non-coding upstream 2262 29627978 ~ 29628335 (-)
G494507 NA non-coding upstream 2736 29628452 ~ 29628787 (-)
G494511 NA non-coding upstream 6521 29632237 ~ 29632439 (-)
G494515 NA non-coding upstream 9412 29635128 ~ 29635482 (-)
G494389 LOC106585296 other downstream 210146 29411215 ~ 29415314 (-)
LOC110525655 LOC106585601 other downstream 1790158 27827231 ~ 27885634 (-)
LOC110525653 NA other downstream 1888482 27734995 ~ 27737024 (-)
G494542 NA other upstream 49607 29675323 ~ 29675573 (-)
LOC110525714 LOC106585251 other upstream 900970 30526034 ~ 30527686 (-)
G495554 NA other upstream 919686 30545402 ~ 30549450 (-)
G495560 NA other upstream 949402 30575118 ~ 30575573 (-)
G496772 NA other upstream 2035677 31661393 ~ 31661618 (-)

Expression



Co-expression Network