G493847


Basic Information

Item Value
gene id G493847
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 29625949 ~ 29626207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU561092
gcatgactttcaaccttcgtctctcccgagcccatacgggagttgtagtgatgagacaagatagtagctactaaaacaattggataccacgaaattggggagaaaaaggggtaaaaaaataaaaataaaaagaatgGTGTTCTTGtcgaccttcaatgctgcagacattttttggtaaccttccccagatctgtgcctcgtcacaatcctgtctcggagctctacggacaattcctatgacctcatggcttggtttttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU561092 True 259 lncRNA 0.43 1 29625949 29626207

Neighbor

gene id symbol gene type direction distance location
psmd9 psmd9 coding upstream 4522 29616510 ~ 29621427 (+)
LOC110526542 NA coding upstream 16390 29607733 ~ 29609559 (+)
gtf2h3 gtf2h3 coding upstream 23179 29598058 ~ 29602770 (+)
LOC110525687 tmed2 coding upstream 31382 29589480 ~ 29594567 (+)
LOC110525686 LOC106585293 coding upstream 39089 29576031 ~ 29586860 (+)
LOC110525691 LOC106585288 coding downstream 11587 29637794 ~ 29646752 (+)
LOC110525692 LOC106585286 coding downstream 26312 29652519 ~ 29692486 (+)
LOC110526646 NA coding downstream 77888 29704095 ~ 29705963 (+)
LOC110525698 LOC106585278 coding downstream 186405 29812612 ~ 29844159 (+)
LOC110525700 rilpl2 coding downstream 230521 29856728 ~ 29863079 (+)
G493835 NA non-coding upstream 13469 29612261 ~ 29612480 (+)
G493749 NA non-coding upstream 93239 29472037 ~ 29532710 (+)
G493779 NA non-coding upstream 95741 29526792 ~ 29530208 (+)
G493747 NA non-coding upstream 154932 29470739 ~ 29471017 (+)
G493746 LOC106585296 non-coding upstream 155988 29469734 ~ 29469961 (+)
G493853 LOC106581475 non-coding downstream 8710 29634917 ~ 29635374 (+)
G493858 NA non-coding downstream 19069 29645276 ~ 29645533 (+)
G493876 NA non-coding downstream 41652 29667859 ~ 29668146 (+)
G493877 NA non-coding downstream 45852 29672059 ~ 29672335 (+)
G493878 NA non-coding downstream 49194 29675401 ~ 29675677 (+)
G493450 NA other upstream 635215 28989430 ~ 28990734 (+)
LOC110525669 NA other upstream 1252757 28370701 ~ 28373267 (+)
LOC110525650 LOC106585598 other upstream 1834379 27738953 ~ 27793944 (+)
LOC110525642 bin3 other upstream 2082954 27488557 ~ 27543022 (+)
G489447 NA other upstream 3941638 25683686 ~ 25684311 (+)
LOC110525701 LOC106585276 other downstream 245805 29871980 ~ 29880651 (+)
G494065 NA other downstream 458377 30084584 ~ 30129769 (+)
G494946 NA other downstream 695815 30322022 ~ 30344847 (+)
G494943 NA other downstream 809755 30435962 ~ 30436685 (+)
4ebp2 LOC106585258 other downstream 891769 30517976 ~ 30523383 (+)

Expression


Co-expression Network