G494530



Basic Information


Item Value
gene id G494530
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 29658349 ~ 29658624 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU561853
GtatatacacagtgtgtgcaaattaggtaggataagggaggtaaggcaataaataggccatagtggcgaaataattacaatatagcaattaaacactggagtgataggtgCAGGCAGGGATAGGTTGCACTGCCTGCactgggcaggtgcaggcagggataggttgaagagcatgtatttagttttacttgcatttaagagcagttggaggtcgCGGAAAGAGagttgcatggcattgaagctcgtctggaggttggttaatacagtgtccaaaga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU561853 True 276 lncRNA 0.45 1 29658349 29658624

Neighbor


gene id symbol gene type direction distance location
LOC110525693 NA coding downstream 4573 29650203 ~ 29654088 (-)
LOC110526522 LOC106585290 coding downstream 61540 29595416 ~ 29596809 (-)
LOC110525685 LOC106585294 coding downstream 82751 29526783 ~ 29575598 (-)
LOC110525684 LOC106585295 coding downstream 137369 29502192 ~ 29520980 (-)
LOC110525681 hectd4 coding downstream 174816 29411204 ~ 29483533 (-)
LOC110525694 LOC106585282 coding upstream 47435 29706059 ~ 29754403 (-)
LOC110525696 LOC106585281 coding upstream 96278 29754902 ~ 29760372 (-)
LOC110525697 rsrc2 coding upstream 111300 29769924 ~ 29786928 (-)
LOC118965073 NA coding upstream 139885 29798141 ~ 29811783 (-)
kmt5ab kmt5a coding upstream 204574 29863198 ~ 29870407 (-)
G494517 NA non-coding downstream 21383 29636636 ~ 29636966 (-)
G494516 NA non-coding downstream 21823 29636281 ~ 29636526 (-)
G494515 NA non-coding downstream 22867 29635128 ~ 29635482 (-)
G494511 NA non-coding downstream 25910 29632237 ~ 29632439 (-)
G494537 NA non-coding upstream 8658 29667282 ~ 29667537 (-)
G494540 LOC106585286 non-coding upstream 15052 29673676 ~ 29674225 (-)
G494544 NA non-coding upstream 18878 29677502 ~ 29678117 (-)
G494546 NA non-coding upstream 21458 29680082 ~ 29680686 (-)
G494556 NA non-coding upstream 34406 29693030 ~ 29695738 (-)
G494389 LOC106585296 other downstream 243035 29411215 ~ 29415314 (-)
LOC110525655 LOC106585601 other downstream 1823047 27827231 ~ 27885634 (-)
LOC110525653 NA other downstream 1921371 27734995 ~ 27737024 (-)
G494542 NA other upstream 16699 29675323 ~ 29675573 (-)
LOC110525714 LOC106585251 other upstream 868062 30526034 ~ 30527686 (-)
G495554 NA other upstream 886778 30545402 ~ 30549450 (-)
G495560 NA other upstream 916494 30575118 ~ 30575573 (-)
G496772 NA other upstream 2002769 31661393 ~ 31661618 (-)

Expression



Co-expression Network