Gene
RNA
| Item | Value |
|---|---|
| gene id | G494700 |
| gene name | LOC106585272 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 29958981 ~ 29959276 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| membrane-associated phosphatidylinositol transfer protein 2-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU562032 | True | 296 | lncRNA | 0.50 | 1 | 29958981 | 29959276 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| kmt5ab | kmt5a | coding | downstream | 88574 | 29863198 ~ 29870407 (-) |
| LOC118965073 | NA | coding | downstream | 147198 | 29798141 ~ 29811783 (-) |
| LOC110525697 | rsrc2 | coding | downstream | 172053 | 29769924 ~ 29786928 (-) |
| LOC110525696 | LOC106585281 | coding | downstream | 198609 | 29754902 ~ 29760372 (-) |
| LOC110525694 | LOC106585282 | coding | downstream | 204578 | 29706059 ~ 29754403 (-) |
| LOC118964857 | NA | coding | upstream | 10791 | 29970067 ~ 29974882 (-) |
| LOC110525703 | LOC106585270 | coding | upstream | 16882 | 29976158 ~ 29980778 (-) |
| LOC110525706 | NA | coding | upstream | 146089 | 30102891 ~ 30141156 (-) |
| LOC110525709 | LOC106585264 | coding | upstream | 230296 | 30189572 ~ 30191815 (-) |
| sftpbb | LOC106585263 | coding | upstream | 240318 | 30199594 ~ 30209590 (-) |
| G494679 | NA | non-coding | downstream | 777 | 29956552 ~ 29958204 (-) |
| G494699 | NA | non-coding | downstream | 5592 | 29953181 ~ 29953389 (-) |
| G494698 | NA | non-coding | downstream | 6205 | 29952550 ~ 29952776 (-) |
| G494697 | LOC106585272 | non-coding | downstream | 7490 | 29951258 ~ 29951491 (-) |
| G494694 | NA | non-coding | downstream | 10737 | 29947971 ~ 29948244 (-) |
| G494701 | NA | non-coding | upstream | 337 | 29959613 ~ 29959821 (-) |
| G494702 | NA | non-coding | upstream | 868 | 29960144 ~ 29960726 (-) |
| G494703 | NA | non-coding | upstream | 1707 | 29960983 ~ 29961361 (-) |
| G494672 | LOC106585272 | non-coding | upstream | 3515 | 29962791 ~ 29968300 (-) |
| G494671 | NA | non-coding | upstream | 15210 | 29974486 ~ 29980710 (-) |
| G494542 | NA | other | downstream | 283408 | 29675323 ~ 29675573 (-) |
| LOC110525684 | LOC106585295 | other | downstream | 455590 | 29502192 ~ 29520980 (-) |
| LOC110525681 | hectd4 | other | downstream | 475635 | 29411204 ~ 29483533 (-) |
| G494389 | LOC106585296 | other | downstream | 543667 | 29411215 ~ 29415314 (-) |
| LOC110525655 | LOC106585601 | other | downstream | 2123679 | 27827231 ~ 27885634 (-) |
| LOC110525714 | LOC106585251 | other | upstream | 567410 | 30526034 ~ 30527686 (-) |
| G495554 | NA | other | upstream | 586126 | 30545402 ~ 30549450 (-) |
| G495560 | NA | other | upstream | 615842 | 30575118 ~ 30575573 (-) |
| G496772 | NA | other | upstream | 1702117 | 31661393 ~ 31661618 (-) |
| G496777 | NA | other | upstream | 1711702 | 31670978 ~ 31671927 (-) |
