G495554


Basic Information

Item Value
gene id G495554
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 30545402 ~ 30549450 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU563013
gttcaagggggccgaatactttcgcaaggcactgtagctgcctATAGCCTAATTTacatctgtcaaacaggtaggcctacctcttatttcttaaataggaagaaataagctccaacacaaagccctcttgttgttagtaaAGCTTAATTAAAATGAAGACAGTTTAAATGAACTATGCCTACTTTCATGAGCAATCCATTTCTGATTGATTGTGCTGCTTGAAGCTTCAGGACCACAGTTTAAGTTACTCTAATCATTAACTCTGATAAATATATTATGGGCAAGGAAACATATGGACTTTAATAAAATcaataatatactgaacaaaaatataaatgtaaagtgttggtctcatgtttcacaaaagatcccagacattttccatatgcacagaaAGAAGCTTATGCTTATTTCTCtcatgttgtgcacaaatgtgtttacatccctgttagtgagcatttctcctttgccaagataattcatccatctgacaggtgtggaatataaataaactgattaaacagcatgatcgttacacaggtgcaccttgggccggtacaataaaaggtcactctaaaatgtgcagttttatcacacaacacaatgtcacagatgtctgaagttgagggagtgtgcaattggcttgCTGCCTGCAGGAAtgtacaccagagctgttgccagagaattgaatggtAATTTATCTAcgataagccacctccaacgtcaatttagagaatttggcagtatgtccaaccggccccacaactgcagaccacgccagcccaggacctccacatccagcttcttcacctgcggggttgtctgagaccagccacctggacagctgatgaaacgagGAGTATTTATTATTtgtttgtaataaagcccttttgtgcgGTAAAATGTATGATTGGATGGGCCTGACTCCCCAGTAGGTTGGCCTGACTCCCTAGTGGGTGGGCATaagccctcccaggcccacccatggctgggcccctgcccagtcatgtgaaatccatagattaggcccaattgaatttattttaattaactgatttccttacatgaactgtaactcagtaaaatcgttaatTGTTGCTTGtggcattttttatttttgttcagtatagtagtaGCAAGCTATCAATGTTGACCTCCGGACCTCCTTCTCATCTTTGCACTTTCCTTCTCTAACTAAACAGAACATAAGCTAGGGCTAGTCTGCGCAAAGGTGCAATTTTTGGACTAGgcctaataaaaaaaaaaagatttacagAAGAAACctttgactctcctcctgaaTTACCACTGTAGccctacacagcacagccattgatTAAGCAGCACTGAATGTTTTTGATCAGcaaaagcagagcagagcagggcagggctccgtgtaatgcagcctagtttCATTTACACCATACCAGCAGCTCTCTTAGAAATATAACCTGCTCTGTGCTTCTGAGTATGCACTTCGTAGGCTATGCTTTAAATAATTTGATTTAAAGCACACTAAATAGCCTCTAGGCGCACTTAATATTGCACCCAGAGGAGAATCAGAGATTGAGGGGCGGCATCGGCCAcactatttatttatatttatatacacacactactggttaaacgttttagaacacctataCATACAAGtgtgtttctttatttgtactattttctacattgtagaataatagtgaagacaaactatgaaataacacatggaatcatgtagtaaccaaaagtgttaaacaaatcaaaatatatgagtttcttcaaatagtcaccctttgacttgatgacagctttgcacactgcattctctcaaccagcttcacctggaatgcttttccaacagtcttgaaggagttcccaagtgctgagcacttgttggctgcttttccttcacttcgaggtccaaatcatctcaatttggTTAAGTTCGggggattgtagaggccaggtcatctgatgcagcactccatcactctccttggttatacagcctggaggtgtgttgggtcattgtcctgtgaaaaacaaatgctagtcccactaagcccaaaccagatggtgTGCTttgttctaaataaatcagacagtgtcaccagaaaagcacccccacagcataacaaaatacacatgtggagatcatccgttcacccacactgagtctcacaaagacactgcggttggaaccaaaaatctcaaatttggactccagaccaaaggacaaatttcactggtctaatgtccattgcttatgtttcttggcccaaacaagcctcttattggtgtcctttttatGAGTGGTTTCTgtgcagtaatttgaccatgaaggcctgattcacacagtctcctctgaacagttgatgttgagatatgtctgttacctgaactcagaagcatttatttgggctgcaatttctgaggctggtaactctactgaacttgtcctctgcagcaaaggtaactctgggtcttccattcctgtggcggtcctcatgagagccagtttcatcatagcgcttgatggtttttgagattgactgaccttcatgttttaaagtagcggactgtcatttctctttgcttatttgagctgttcttgccataatatggacttggtcttttaccaaatagggctatcttctgtatacccccctaccttgtcacaacacaactgattggctcaaactcattaagaaggatagaaatgggctgatggtgaagtagacatactcggtattcatatcacaaaagatAGAAATAAGCTTTCCACAATGAGTTTTAATAGAAAActtagacaagatcctgcaagcatggagaggtaaatacctgtctataaattgccctgattaactccttagtcatatctgtTTACTCACTGACTTATGGcactgcctactcctgatgatttgtttttcaaatcatatgagcaaaaaatatttcgcTTTCTGGGACACTAAACCAAACAAAGTAAAACctgcctatctatataatgaatatgaattgggttGGGTTGAGATTATTATATATAAAAGCGCTAAACCTCTCAAAGcttcactcattcaaaagttttatttgaaccccaaatggttctcaattagattactaagaaaagctcatccattgtttaaaaatggcctttttTGCAGATTGCCAAGTCTCATTTTCAATGAATTGAAAATTATACGTTGAAAAAcgtatctctctttttcaaacaagcattgcagagctggctaaaATTTAAATTTCacccccctgaaaagatagaacaaatattatggctgatctcatgtgctggttgataaaatacctgtatttatgggaaagatgtttgaaaagggtattttgttcttaaattatattgtaaattggaatggtggagttatgtccttcatggagttatcagaattgtacgggaaggtctgctcaatccaagaatacaaacaattgattacagcattacccccAAAAGAGAGGAgtcaggtggcagcgggaggaggtagggaactggcctgtctgcccaatataaaggatcatgactggaggaggcaggtggcagcgggaggaggtagggaactggcctgtctgcccaatataaaggatcaaaactggcggcggaataaaaatagcataaataggaaagtataccagtttcatttgaggaccaggatgttgacaactgtgccttACAGATTGAAAAACCAagtttcagctaaaattattatatataattcttgccaccaacaaaatgttgaatatttggggataatatcatcgaagctctgcagattttgttgtgagaatacagaatcaatagaccatttattttggtattgccctcaggtagcctgtttctgggttcaggaatggctgaaaatgcatagcattgatccaaaattggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU563013 True 3911 TUCP 0.40 2 30545402 30549450

Neighbor

gene id symbol gene type direction distance location
LOC110525714 LOC106585251 coding downstream 17716 30526034 ~ 30527686 (-)
LOC118965020 NA coding downstream 220456 30311060 ~ 30324946 (-)
sftpbb LOC106585263 coding downstream 335812 30199594 ~ 30209590 (-)
LOC110525709 LOC106585264 coding downstream 353587 30189572 ~ 30191815 (-)
LOC110525706 NA coding downstream 437707 30102891 ~ 30141156 (-)
si:ch211-102c2.8 LOC106585256 coding upstream 11971 30561421 ~ 30579113 (-)
LOC110525719 LOC106580333 coding upstream 30028 30579478 ~ 30656421 (-)
LOC110525721 LOC106584972 coding upstream 113499 30662949 ~ 30686072 (-)
LOC110525722 LOC106584973 coding upstream 145335 30694785 ~ 30748758 (-)
LOC110525723 LOC106584974 coding upstream 208959 30758409 ~ 30798593 (-)
G495546 NA non-coding downstream 10805 30534352 ~ 30534597 (-)
G495543 NA non-coding downstream 14054 30531147 ~ 30531348 (-)
G495540 NA non-coding downstream 16831 30528274 ~ 30528571 (-)
G495505 LOC106585258 non-coding downstream 22021 30522006 ~ 30523381 (-)
G495502 NA non-coding downstream 26988 30501931 ~ 30518414 (-)
G495578 NA non-coding upstream 67563 30617013 ~ 30617233 (-)
G495581 NA non-coding upstream 77030 30626480 ~ 30626694 (-)
G495629 NA non-coding upstream 156848 30706298 ~ 30917821 (-)
G494542 NA other downstream 869829 29675323 ~ 29675573 (-)
LOC110525684 LOC106585295 other downstream 1042011 29502192 ~ 29520980 (-)
LOC110525681 hectd4 other downstream 1062056 29411204 ~ 29483533 (-)
G494389 LOC106585296 other downstream 1130088 29411215 ~ 29415314 (-)
G495560 NA other upstream 25668 30575118 ~ 30575573 (-)
G496772 NA other upstream 1111943 31661393 ~ 31661618 (-)
G496777 NA other upstream 1121528 31670978 ~ 31671927 (-)
G496851 NA other upstream 1294013 31843463 ~ 31892649 (-)
LOC110525784 LOC106585031 other upstream 2130592 32680037 ~ 32682899 (-)

Expression


Co-expression Network