Gene
RNA
| Item | Value |
|---|---|
| gene id | G495066 |
| gene name | LOC106585256 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 30565255 ~ 30565827 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| eukaryotic translation initiation factor 3 subunit A-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU562453 | True | 573 | lncRNA | 0.48 | 1 | 30565255 | 30565827 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525716 | LOC106585257 | coding | upstream | 5459 | 30552561 ~ 30559796 (+) |
| 4ebp2 | LOC106585258 | coding | upstream | 41873 | 30517976 ~ 30523383 (+) |
| LOC110525713 | LOC106585259 | coding | upstream | 59190 | 30428452 ~ 30506065 (+) |
| LOC110525712 | LOC106585261 | coding | upstream | 281733 | 30247899 ~ 30283522 (+) |
| LOC110526737 | NA | coding | upstream | 322840 | 30232592 ~ 30242415 (+) |
| si:ch211-225b11.4 | LOC106584980 | coding | downstream | 440720 | 31006547 ~ 31022524 (+) |
| LOC110525729 | p3ip1 | coding | downstream | 459954 | 31025781 ~ 31037928 (+) |
| LOC110525731 | LOC106584982 | coding | downstream | 533240 | 31099067 ~ 31150187 (+) |
| LOC110525733 | LOC106584983 | coding | downstream | 649249 | 31215076 ~ 31305586 (+) |
| LOC110525738 | ficd | coding | downstream | 841177 | 31407004 ~ 31428582 (+) |
| G495053 | NA | non-coding | upstream | 32550 | 30532430 ~ 30532705 (+) |
| G495029 | NA | non-coding | upstream | 93537 | 30471416 ~ 30471718 (+) |
| G495027 | NA | non-coding | upstream | 104811 | 30459865 ~ 30460444 (+) |
| G494961 | NA | non-coding | upstream | 213313 | 30350947 ~ 30351942 (+) |
| G495067 | NA | non-coding | downstream | 54 | 30565881 ~ 30566203 (+) |
| G495071 | NA | non-coding | downstream | 4663 | 30570490 ~ 30571002 (+) |
| G495073 | NA | non-coding | downstream | 7632 | 30573459 ~ 30573688 (+) |
| G495075 | NA | non-coding | downstream | 9492 | 30575319 ~ 30575533 (+) |
| G495077 | NA | non-coding | downstream | 13763 | 30579590 ~ 30580176 (+) |
| G494943 | NA | other | upstream | 128570 | 30435962 ~ 30436685 (+) |
| G494946 | NA | other | upstream | 220408 | 30322022 ~ 30344847 (+) |
| G494065 | NA | other | upstream | 435486 | 30084584 ~ 30129769 (+) |
| LOC110525701 | LOC106585276 | other | upstream | 684606 | 29871980 ~ 29880651 (+) |
| G495076 | LOC106585256 | other | downstream | 10278 | 30576105 ~ 30576756 (+) |
| G495132 | NA | other | downstream | 166525 | 30732352 ~ 30732890 (+) |
| G495920 | LOC106584987 | other | downstream | 729119 | 31294946 ~ 31312737 (+) |
| polk | polk | other | downstream | 2362091 | 32926258 ~ 32936958 (+) |
