G495822



Basic Information


Item Value
gene id G495822
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 31096504 ~ 31096728 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU563302
tatctcaagttttgagggagtgtgcaattggcatgctgactgcaggaatgtccaccagagctgttgccaaataattgaaTGTTCGTTTCTctatgttgttttagagaatttggcagtgcatccaacctgcctcacaaccacagccccaggatctccacatccagcttcttcacctccGGGATCGTCTGAGAGGGAGCTGAGgcatatttctgtctgtaataaagc

Function


NR:

description
hypothetical protein EH28_03751

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU563302 True 225 lncRNA 0.47 1 31096504 31096728

Neighbor


gene id symbol gene type direction distance location
LOC110525730 LOC106584981 coding downstream 614 31058538 ~ 31095890 (-)
LOC110525727 LOC106584979 coding downstream 96101 30966155 ~ 31000403 (-)
dnah10 dnah10 coding downstream 130429 30905997 ~ 30966075 (-)
LOC110525725 LOC106584977 coding downstream 190693 30831347 ~ 30905811 (-)
LOC110525724 LOC106584976 coding downstream 275885 30802629 ~ 30820619 (-)
LOC110525732 LOC106584984 coding upstream 208879 31305607 ~ 31306398 (-)
LOC110525735 LOC106584987 coding upstream 214172 31310900 ~ 31315063 (-)
LOC110525734 LOC106584947 coding upstream 218486 31315214 ~ 31320162 (-)
LOC110525736 LOC106584988 coding upstream 331932 31428660 ~ 31445370 (-)
tmem119a LOC106584989 coding upstream 361314 31458042 ~ 31464600 (-)
G495772 NA non-coding downstream 87271 31008141 ~ 31009233 (-)
G495736 NA non-coding downstream 169239 30927013 ~ 30927265 (-)
G495735 NA non-coding downstream 176599 30919573 ~ 30919905 (-)
G495629 NA non-coding downstream 178683 30706298 ~ 30917821 (-)
G495823 NA non-coding upstream 60 31096788 ~ 31097015 (-)
G495825 LOC106584982 non-coding upstream 2379 31099107 ~ 31099810 (-)
G495831 NA non-coding upstream 12181 31108909 ~ 31124425 (-)
G495879 NA non-coding upstream 87710 31184438 ~ 31184705 (-)
G495908 NA non-coding upstream 112895 31209623 ~ 31209899 (-)
G495560 NA other downstream 520931 30575118 ~ 30575573 (-)
G495554 NA other downstream 547054 30545402 ~ 30549450 (-)
LOC110525714 LOC106585251 other downstream 568958 30526034 ~ 30527686 (-)
G494542 NA other downstream 1420931 29675323 ~ 29675573 (-)
LOC110525684 LOC106585295 other downstream 1593113 29502192 ~ 29520980 (-)
G496772 NA other upstream 564665 31661393 ~ 31661618 (-)
G496777 NA other upstream 574250 31670978 ~ 31671927 (-)
G496851 NA other upstream 746735 31843463 ~ 31892649 (-)
LOC110525784 LOC106585031 other upstream 1583314 32680037 ~ 32682899 (-)
G498484 rpl6 other upstream 2230779 33327507 ~ 33330504 (-)

Expression



Co-expression Network