Gene
RNA
| Item | Value |
|---|---|
| gene id | G495942 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 31252863 ~ 31259303 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU563431 | False | 243 | lncRNA | 0.42 | 2 | 31252863 | 31259303 |
| TU563430 | False | 260 | lncRNA | 0.42 | 3 | 31255194 | 31259303 |
| TU563429 | True | 276 | lncRNA | 0.42 | 2 | 31258970 | 31259303 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525731 | LOC106584982 | coding | upstream | 102676 | 31099067 ~ 31150187 (+) |
| LOC110525729 | p3ip1 | coding | upstream | 214935 | 31025781 ~ 31037928 (+) |
| si:ch211-225b11.4 | LOC106584980 | coding | upstream | 230339 | 31006547 ~ 31022524 (+) |
| LOC110525716 | LOC106585257 | coding | upstream | 693067 | 30552561 ~ 30559796 (+) |
| 4ebp2 | LOC106585258 | coding | upstream | 729481 | 30517976 ~ 30523383 (+) |
| LOC110525738 | ficd | coding | downstream | 147701 | 31407004 ~ 31428582 (+) |
| LOC110525744 | LOC105025588 | coding | downstream | 385400 | 31644703 ~ 31654452 (+) |
| LOC110525750 | NA | coding | downstream | 397035 | 31656338 ~ 31660186 (+) |
| LOC110526885 | LOC106584996 | coding | downstream | 400930 | 31660233 ~ 31671928 (+) |
| zgc:158398 | LOC106585000 | coding | downstream | 416035 | 31675338 ~ 31683982 (+) |
| G495930 | NA | non-coding | upstream | 16506 | 31228552 ~ 31236357 (+) |
| G495929 | NA | non-coding | upstream | 16810 | 31228274 ~ 31236053 (+) |
| G495927 | NA | non-coding | upstream | 21721 | 31222963 ~ 31231142 (+) |
| G495911 | NA | non-coding | upstream | 41623 | 31210982 ~ 31211240 (+) |
| G495910 | NA | non-coding | upstream | 41934 | 31210713 ~ 31210929 (+) |
| G495976 | NA | non-coding | downstream | 61141 | 31320444 ~ 31321010 (+) |
| G495978 | NA | non-coding | downstream | 62628 | 31321931 ~ 31322161 (+) |
| G495981 | NA | non-coding | downstream | 67031 | 31326334 ~ 31326753 (+) |
| G495995 | NA | non-coding | downstream | 78915 | 31338218 ~ 31342976 (+) |
| G496024 | NA | non-coding | downstream | 141377 | 31400680 ~ 31409129 (+) |
| G495132 | NA | other | upstream | 519973 | 30732352 ~ 30732890 (+) |
| G495076 | LOC106585256 | other | upstream | 676107 | 30576105 ~ 30576756 (+) |
| G494943 | NA | other | upstream | 816178 | 30435962 ~ 30436685 (+) |
| G495920 | LOC106584987 | other | downstream | 35643 | 31294946 ~ 31312737 (+) |
| polk | polk | other | downstream | 1668615 | 32926258 ~ 32936958 (+) |
| LOC110525799 | LOC106585046 | other | downstream | 1887164 | 33135282 ~ 33165186 (+) |
| c6h22orf39 | cssa24h22orf39 | other | downstream | 2058334 | 33317578 ~ 33320353 (+) |
| LOC110525816 | LOC106585060 | other | downstream | 2202332 | 33447246 ~ 33465055 (+) |
