G496029


Basic Information

Item Value
gene id G496029
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 31423689 ~ 31423905 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU563536
gagttacacatggagtaaaacaaacatacagtcaataatacagtataaacaagtctatatacaatgtgagcaaatgaggtgagataagggaggtaaaggcaaaaaaaaaggccatggtggcaaagtaaatacaatatagcaagtaaaacactggaatggtagatttgcagtggaagaatgtgcaaagtagaaataaaaataatggggtgcaaaggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU563536 True 217 lncRNA 0.35 1 31423689 31423905

Neighbor

gene id symbol gene type direction distance location
LOC110525733 LOC106584983 coding upstream 118103 31215076 ~ 31305586 (+)
LOC110525731 LOC106584982 coding upstream 273502 31099067 ~ 31150187 (+)
LOC110525729 p3ip1 coding upstream 385761 31025781 ~ 31037928 (+)
si:ch211-225b11.4 LOC106584980 coding upstream 401165 31006547 ~ 31022524 (+)
LOC110525716 LOC106585257 coding upstream 863893 30552561 ~ 30559796 (+)
LOC110525744 LOC105025588 coding downstream 220798 31644703 ~ 31654452 (+)
LOC110525750 NA coding downstream 232433 31656338 ~ 31660186 (+)
LOC110526885 LOC106584996 coding downstream 236328 31660233 ~ 31671928 (+)
zgc:158398 LOC106585000 coding downstream 251433 31675338 ~ 31683982 (+)
LOC110525752 LOC106584997 coding downstream 262032 31685937 ~ 31710430 (+)
G496024 NA non-coding upstream 14560 31400680 ~ 31409129 (+)
G495995 NA non-coding upstream 80713 31338218 ~ 31342976 (+)
G495981 NA non-coding upstream 96936 31326334 ~ 31326753 (+)
G495978 NA non-coding upstream 101528 31321931 ~ 31322161 (+)
G495976 NA non-coding upstream 102679 31320444 ~ 31321010 (+)
G496032 sart3 non-coding downstream 11083 31434988 ~ 31435447 (+)
G496038 NA non-coding downstream 25101 31449006 ~ 31449328 (+)
G496039 NA non-coding downstream 25780 31449685 ~ 31450003 (+)
G496042 NA non-coding downstream 30053 31453958 ~ 31454228 (+)
G496098 NA non-coding downstream 121581 31545486 ~ 31550403 (+)
G495920 LOC106584987 other upstream 110952 31294946 ~ 31312737 (+)
G495132 NA other upstream 690799 30732352 ~ 30732890 (+)
G495076 LOC106585256 other upstream 846933 30576105 ~ 30576756 (+)
4ebp2 LOC106585258 other upstream 900306 30517976 ~ 30523383 (+)
polk polk other downstream 1504013 32926258 ~ 32936958 (+)
LOC110525799 LOC106585046 other downstream 1722562 33135282 ~ 33165186 (+)
c6h22orf39 cssa24h22orf39 other downstream 1893732 33317578 ~ 33320353 (+)
LOC110525816 LOC106585060 other downstream 2037730 33447246 ~ 33465055 (+)
G499111 NA other downstream 2727235 34151140 ~ 34151737 (+)

Expression


Co-expression Network