G496777


Basic Information

Item Value
gene id G496777
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 31670978 ~ 31671927 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU564405
TTTTTCCCAGTACAATTTCCTACCTCTATATTGTCATTTGTGGAACTCCAGCCCCATTTAAAGTTTTCCCGTCTCACATCACATTCAATGACAGCCAGTACGagcaaaacataaaaaataaaacattaaaacccAGTTAAAACCCACTTCCTTATCTCAAGATTGTTCACACAACAGAGCAGTAAATATACATGCTAACCCTGAGCTTACTGTTGTACTGTATACctaatacattacattacttttGTAATCATTTCACTTCTGAAATGAAACCCATCACCCCTTAGTTTATTCTCTGACACGGAGGGGTCTGTGCGTGTAGGTTTAATATAAGGGGTATATTTAAATTTTAGTcagttagcagacgctcttatccagagcgacttacagttagtgcattcatcttaagatagctaggtgggacaatcacatatcacaggcatagaatGTACATTTTTTCTCAAGTAAATAAATCAGTAGTCAGAGCTAGAACGGGAGGTGGCAGAATGGAGTtctcaggttggggtgtaggatttgagcatagcctgaaggtcgggaggggcagttcctcttgctgttccataggtaagcaccatggtcttgaaGTGGATTTGAGCTTTGagtggaagccagtggagtgtacGAAGGACTGGGGTGACAatagagaacttgggaaggttgaaaaccaggtgCGCTGCagtgttctggataagttgcaggggtttgatggcacaagcggggttTTCAACCTAGAACCAAGCCCTGGGgaacaccagtagtgagagtacgtggtgcagacacagatcctctccacgtcacctggtaggagcggcctgccaggtaggatgcaatccaagaatGTGTatagacgcccagccctgagagggttgAGAGGAGGATATGATGGTTCAGTGTCAaaggcagcggatagatctaggaggatgagaaca

Function

NR:

description
reverse transcriptase-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564405 True 950 TUCP 0.44 1 31670978 31671927

Neighbor

gene id symbol gene type direction distance location
gatc gatc coding downstream 14679 31652136 ~ 31656299 (-)
LOC118936268 ublp coding downstream 29427 31640221 ~ 31641551 (-)
ublp ublp coding downstream 35142 31634776 ~ 31635836 (-)
LOC110525743 LOC106584993 coding downstream 39781 31616647 ~ 31631197 (-)
ssh1a LOC106584991 coding downstream 63219 31545143 ~ 31607759 (-)
LOC110525757 LOC106585001 coding upstream 63927 31735854 ~ 31758504 (-)
LOC110525759 LOC106585003 coding upstream 129042 31800969 ~ 31824346 (-)
LOC118964859 NA coding upstream 132913 31804840 ~ 31806652 (-)
LOC110525762 LOC106585005 coding upstream 156803 31828730 ~ 31857288 (-)
si:ch211-113d22.2 LOC106585007 coding upstream 188239 31860166 ~ 31864841 (-)
G496776 NA non-coding downstream 1342 31669254 ~ 31669636 (-)
G496775 NA non-coding downstream 2621 31668033 ~ 31668357 (-)
G496771 NA non-coding downstream 11031 31659480 ~ 31659947 (-)
G496652 NA non-coding downstream 245812 31424921 ~ 31425166 (-)
G496650 NA non-coding downstream 247072 31423689 ~ 31423906 (-)
G496789 NA non-coding upstream 32737 31704664 ~ 31705045 (-)
G496801 NA non-coding upstream 87220 31759147 ~ 31759455 (-)
G496919 NA non-coding upstream 322531 31994458 ~ 31994683 (-)
G496920 NA non-coding upstream 323349 31995276 ~ 31995499 (-)
G496932 NA non-coding upstream 352001 32023928 ~ 32024730 (-)
G496772 NA other downstream 9360 31661393 ~ 31661618 (-)
G495560 NA other downstream 1095405 30575118 ~ 30575573 (-)
G495554 NA other downstream 1121528 30545402 ~ 30549450 (-)
LOC110525714 LOC106585251 other downstream 1143432 30526034 ~ 30527686 (-)
G494542 NA other downstream 1995405 29675323 ~ 29675573 (-)
G496851 NA other upstream 171536 31843463 ~ 31892649 (-)
LOC110525784 LOC106585031 other upstream 1008115 32680037 ~ 32682899 (-)
G498484 rpl6 other upstream 1655580 33327507 ~ 33330504 (-)
LOC110525812 LOC103397138 other upstream 1660723 33332650 ~ 33336818 (-)
G498960 NA other upstream 2368432 34040359 ~ 34041174 (-)

Expression


Co-expression Network