G496460


Basic Information

Item Value
gene id G496460
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 32207065 ~ 32207269 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU564037
gccgcccccaggtggtgagggtaggcaacaacatctccaccccgctgatcctcaacactggggccacacaagggtgcgttctgagccctctcctgtactccctgttcacccacgactgcgtggccacgcacgcctccaactcaatcatcaagtttgcggacgacaccacagtggtaggcttgattaccaacaacgacgagacggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564037 True 205 lncRNA 0.60 1 32207065 32207269

Neighbor

gene id symbol gene type direction distance location
rgmb LOC106585015 coding upstream 5701 32188430 ~ 32201364 (+)
LOC118965021 NA coding upstream 189686 32014529 ~ 32017379 (+)
LOC110525771 LOC106585012 coding upstream 194031 32003116 ~ 32013034 (+)
fancg fancg coding upstream 204406 31995567 ~ 32002659 (+)
LOC110525768 LOC106585010 coding upstream 230659 31955764 ~ 31976406 (+)
erap2 LOC106585017 coding downstream 4092 32211361 ~ 32224832 (+)
lnpep LOC106585016 coding downstream 24819 32232088 ~ 32250568 (+)
cdk7 cdk7 coding downstream 196142 32403411 ~ 32409712 (+)
serinc5 LOC106585022 coding downstream 207116 32414385 ~ 32469172 (+)
mtx3 mtx3 coding downstream 278595 32485864 ~ 32507844 (+)
G496420 NA non-coding upstream 71734 32132298 ~ 32135331 (+)
G496403 NA non-coding upstream 105469 32101363 ~ 32101596 (+)
G496400 NA non-coding upstream 109099 32097692 ~ 32097966 (+)
G496399 NA non-coding upstream 110081 32096759 ~ 32096984 (+)
G496396 NA non-coding upstream 112851 32093929 ~ 32094214 (+)
G496429 NA non-coding downstream 19818 32227087 ~ 32228124 (+)
G496470 NA non-coding downstream 55086 32262355 ~ 32263061 (+)
G496486 NA non-coding downstream 78807 32286076 ~ 32286354 (+)
G496500 NA non-coding downstream 98557 32305826 ~ 32306305 (+)
G496505 setbp1 non-coding downstream 113244 32320513 ~ 32325960 (+)
G495920 LOC106584987 other upstream 894328 31294946 ~ 31312737 (+)
si:ch211-225b11.4 LOC106584980 other upstream 1196461 31006547 ~ 31022524 (+)
G495132 NA other upstream 1474175 30732352 ~ 30732890 (+)
G495076 LOC106585256 other upstream 1630309 30576105 ~ 30576756 (+)
4ebp2 LOC106585258 other upstream 1683682 30517976 ~ 30523383 (+)
polk polk other downstream 720649 32926258 ~ 32936958 (+)
LOC110525799 LOC106585046 other downstream 939198 33135282 ~ 33165186 (+)
c6h22orf39 cssa24h22orf39 other downstream 1110368 33317578 ~ 33320353 (+)
LOC110525816 LOC106585060 other downstream 1254366 33447246 ~ 33465055 (+)
G499111 NA other downstream 1943871 34151140 ~ 34151737 (+)

Expression


Co-expression Network