G497032


Basic Information

Item Value
gene id G497032
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 32246193 ~ 32250513 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU564702
AGCCTTACATTTTTCACCATCATTCAACCCCAGtgcaaaaaaagtttaaaatgaTGAGCAACAATCTCAAGGTGAGCTTGGCATAGGAATACACTAACATAGAATCATAATCTAGAGACATGCCACCTCCATCTGGGTCTTCATACACTTCACCTAAACCGTCTGTCATAAGGCATTATAACACTGTCGTAAGACTGACATAGAAAACAAGCAGTCATTATGTAGGCTTTGGCTAATTAACTTGATATAAAATCTAACAAACCTAAATAATAGTTTGAGTTATGGTAGTGGAAAAGGCCGTTTTCATGAGATTGCATCAGCTGTAATGATGACTGGTTATATAACATGTCATCTTTGTGGCAGTGTTAGGTAGGCTTTATGCCAGTAGGTTCAGTGAAGAGTTAACAGTTACTAACATATCTCCCTGAGCTCTGAGGTACAGTACGGGCTGTTGTTTTctggtgagtgagtgaatgaTTAACATCTAAAAATCAACAATATGATTCACAATTCTGCACCAAAGCTACCATATTTGATTTCATAGTGCTatcaattggctcattcatcccccctctcccctgtaactattccccaggtccctgctgtaaatgagaacatgttctcagtcaacttacctggtgaaatatgggttaaataaaaaataaatatcataaccaccaataTGACCTGGTTTTTCCAATGTTTTCAACATGACATTCAGAGTGAGACAGGGAAGTGAATCCTCCAGAATGAGCCAGTACCAACAAGAGACATACAGACATCTGAGGCTTTAGATTAGAAGAGGAGCTAGCTAGACACTCAGTCATTGGTCATGCTGTTTTGTAATAGAAGAGTTCCTTCAGGACATTCAGTGGTCGACCACTGGAGCTAGTGCTGCTGTAGCAGAGAGGAGGTAGCATGAAGATGCCCCTAAACACAGATCCAGGGTCTTCAttggctttggtggtggtaaCTGGCCCTAGATCTGTTCCTAAAGGGAGCTCTAACAGAGCCAGCCGGGAGGCTGAAACAATTACGTCAACAACAAGGCTACCATACAGAACTGAATACCATAAACCTCACACACAGCGAGACAAAGTAACCTAGCCCTGACTGAGCCAGGTTAACCAATCACAGAACTTAAACTGGTGAAATTACTTTCTGATTATCCACACTTTGTTGGACTACAGACACGGCATAGAAAACGACTCTACCCAGCTGTACAGACGCAACACTGTTGGGTCCCTCACTGTCAAGTCCTTTAATGGAAAAGACAGAGACATAATCAGGCGACCCCGTATATTAACCACAACATTCACCAACATTCACCTTTTTggtgagtttgggaaaccctgccatATTCCAACATGAGGCATTGAAGTGAGCCAACATTATAAATCAGTATACGTCATTGTTTAGTAAAAACAAAACCCTTTGACCGGGACTCTTATGTCTGTGGTATCACACtgtacacactatatacacacacacaacagaaacCAAACTTAAACAACAAGTGAGAGATCTGCTCACATAAAATAGGACAAGCAAAACGCAAGGTAGAGATAggagtaataataataataacatcttTACAAGCATTGTGAGAGTGAAATATTCTGTACACAGATCGCCTCATATGCAAAGGAAAAGTAGAAAAGCGGTTTTGGGACCagatcaacaatggactaatgaaataaATACCAAAAGATCATtcttgggtggagttttcctttaactttcaaaatgtaacaaataaagTTACATCAACAGAAGAAGTGCTCACAGGGAGTGCTGGGGGGGGAGATGCTTCAAGATTCATCAAAACAACGTTTCAGCAACGTTTCCACTATCCAACCAATACTTCTTGAGGTCTAAATAAAAGACCTAGTGGTGGAAATGTGGTACAGTAGAACTTTGGGAGCATCTAAACAGTGAGAAGGTATTTTCATGTTCCTTCAACATGTTACTGGTAGCCGTACATGTTCTGGCTGAAGCCTGGGTAGTATTGTGTATCAGCTCTGTAACCCAACTCTGGCCTTCAACAGACATTCTCCCATCTCCCCCACTGCTCACAGTCAGTAGGACAGTCATGAGGAGGTTGGTGTCAGGGCCAGGGTCTGAGAGAACAGTTAGTCACTGCACCATGAGTTTCACAGGTGACCCATACTGATGACACGTGGCCAGCGTTGATGACAGACAGCATGTTCTCTTCCTGTATTCCCTTTCCTTATTTTTCAGGTGGCTGCTACACATACACTATGTGGTGGCAGAAGGGGCGAGTTACCGCCATACAATGTGAAGCACGTCGAgtttgaaagaaagagagacgggCTGCTGTATCCAGGCATGGTGTCGTGGTAAAAGCTGTAGGGGAAGTTTGCTTGACAGCATAGAGAGGAATTTGAGTTCACCCTGAGCTAAATACTACTAAAACTCATAGGACAAGCCTAAAAATAACACCATGTTCCCTATACAgtaaagtgcactacttctgatcatTGCGAAAAGTAGTTTAAAAAAGTAGGAACAATAAGGGGAATATGAGACAAGCCCTACGACAGTGCAAAAGCTGCTGTTGCCATGCCAACACGGTCCCCAGAGCGGGTTGTCGGGGGCTACAGTTGCCCAGCGGCCATGTTAGAGCCAGTCTCTAAGTGTTGCGAGGTTCCTGTCCATCCAGTGCTGGTTCAGTCTGATGGTCTCTAAAGCCTCCTGGACGCTACGCATCTGAGAGCCCCGCTCCTTCAGACTGGAGAAGAAACCCTGGACTTCCTCCAGGTGTGTCTGAGTAGAGAACTGGGAGGTGGTGGACTTGACGATGCTCTGGATGGAATA

Function

NR:

description
leucyl-cystinyl aminopeptidase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564702 True 2838 lncRNA 0.43 3 32246193 32250513

Neighbor

gene id symbol gene type direction distance location
LOC110525023 NA coding downstream 165427 32074123 ~ 32080766 (-)
epg5 epg5 coding downstream 174346 32049187 ~ 32071847 (-)
LOC110517556 dnajb5 coding downstream 212523 32021741 ~ 32033670 (-)
LOC110525767 LOC106584919 coding downstream 261504 31973832 ~ 31984689 (-)
srrd srrd coding downstream 298800 31944549 ~ 31947393 (-)
slc14a2 LOC106585019 coding upstream 9833 32260346 ~ 32274147 (-)
setbp1 setbp1 coding upstream 69982 32320495 ~ 32378525 (-)
thbs4a LOC106585023 coding upstream 218799 32469312 ~ 32482950 (-)
LOC110526888 LOC106585027 coding upstream 258167 32508680 ~ 32520900 (-)
LOC110525784 LOC106585031 coding upstream 429524 32680037 ~ 32682899 (-)
G497021 NA non-coding downstream 17800 32227029 ~ 32228393 (-)
G497013 NA non-coding downstream 42818 32201806 ~ 32203375 (-)
G496993 NA non-coding downstream 57086 32155680 ~ 32189107 (-)
G496982 NA non-coding downstream 110861 32132298 ~ 32135332 (-)
G496966 NA non-coding downstream 143953 32101963 ~ 32102240 (-)
G497050 NA non-coding upstream 36998 32287511 ~ 32287804 (-)
G497060 NA non-coding upstream 46741 32297254 ~ 32375937 (-)
G497075 NA non-coding upstream 76169 32326682 ~ 32326966 (-)
G497112 NA non-coding upstream 137703 32388216 ~ 32388472 (-)
G496851 NA other downstream 353544 31843463 ~ 31892649 (-)
G496777 NA other downstream 574266 31670978 ~ 31671927 (-)
G496772 NA other downstream 584575 31661393 ~ 31661618 (-)
G495560 NA other downstream 1670620 30575118 ~ 30575573 (-)
G495554 NA other downstream 1696743 30545402 ~ 30549450 (-)
G498484 rpl6 other upstream 1076994 33327507 ~ 33330504 (-)
LOC110525812 LOC103397138 other upstream 1082137 33332650 ~ 33336818 (-)
G498960 NA other upstream 1789846 34040359 ~ 34041174 (-)
G501142 NA other upstream 3514853 35765366 ~ 35767929 (-)

Expression


Co-expression Network