G497849


Basic Information

Item Value
gene id G497849
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 33193078 ~ 33197388 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU565615
CCTGTACATCTACTATATCTGAAAAGCAGACGCAGTAGACATCTGACATAAAGAAGTGCGTGTCGGTGTCGTAACATGCCGCCGGAATATCTCTATTTCTCTGGAGCTAGGCCTAAGTTTCTCTTCTTTGATAAAGGTTACATATTTTTTTCTAAATAtcatactgagcaaaaatataaacacaacatgcaacaatttcaaggatTTTACTGAGTCACAGTTTATgtgaagaaatcagtcaattgaaatgaattcattaggccctctATGGATccgtctatggatttcacatgactgggaataccgATATGCATCTTTTGGTCACAGATACGTTGAAAAAAAGGTATTggcgtagatcagaaaaccagtcagtaactGGTGTGAacaacatttgctaaaatttctttAAGGCCTCAACCTCCCCCAGTAGCCAATAGATCCATTTTTTTAACTGCTCGGTCATTGTTGTAAGTAATACTCTCTCTTCTGGAGACGTAGTTATAAAAACGTCCCCCTCCAatgttacatttttaattttagaCCGCGACTTCCCTTCAGTTACGCTCGCAGAGCTTGAGGAAAGGTattctCTTGTTTGTCTTTATGTATCTGATACTTTTTCGAGCATATCAAAATGCTGATCAATAAATAGTTCAAGGTTTACTATATTATCCAGAATGTTTGTTTTGCAGTTATCAGCTAATCCTCAATTTTTCATATTAATTTATGGCACAagctgagcctgcctgccttcatAACTGATTATGAACCTCTGCCTGTCCGtcgacctgccctttgcctgcccCCGTGTTATAATAAATGatctgagaactgtactatccgtctcctgtgtctgcatctggatcATATCCTGAGGCGTGATAGCCTGGGCAGGGCCtgactcctctctcccctcctcctttttACTGGGGGCTGGACctgactcctctctcctcctttttacTGGGGGGCTGGGCCTgacttcccccccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU565615 True 992 lncRNA 0.42 2 33193078 33197388

Neighbor

gene id symbol gene type direction distance location
LOC110525801 ppc1a coding upstream 15918 33173522 ~ 33177160 (+)
LOC110525799 LOC106585046 coding upstream 27892 33135282 ~ 33165186 (+)
iqgap2 LOC106585041 coding upstream 100336 33008191 ~ 33092742 (+)
sv2ca LOC106585040 coding upstream 188959 32969862 ~ 33004119 (+)
LOC110525793 NA coding upstream 226998 32960820 ~ 32966080 (+)
LOC110525805 LOC106585050 coding downstream 81810 33279198 ~ 33280948 (+)
LOC110525806 LOC106585051 coding downstream 115967 33313355 ~ 33317175 (+)
c6h22orf39 cssa24h22orf39 coding downstream 120190 33317578 ~ 33320353 (+)
LOC110525808 LOC106585052 coding downstream 124551 33321939 ~ 33326388 (+)
LOC110525811 rpl6 coding downstream 130115 33327503 ~ 33331597 (+)
G497749 NA non-coding upstream 9926 33180315 ~ 33183152 (+)
G497740 LOC106585045 non-coding upstream 89295 33088967 ~ 33103783 (+)
G497402 NA non-coding upstream 254988 32937884 ~ 32938090 (+)
G497253 NA non-coding upstream 479873 32653971 ~ 32713205 (+)
G497852 NA non-coding downstream 754 33198142 ~ 33198539 (+)
G497853 NA non-coding downstream 1877 33199265 ~ 33199491 (+)
G497855 NA non-coding downstream 11462 33208850 ~ 33209789 (+)
G497921 LOC103397138 non-coding downstream 135262 33332650 ~ 33336735 (+)
G497925 NA non-coding downstream 149687 33347075 ~ 33347369 (+)
polk polk other upstream 264227 32926258 ~ 32936958 (+)
G495920 LOC106584987 other upstream 1880341 31294946 ~ 31312737 (+)
si:ch211-225b11.4 LOC106584980 other upstream 2182474 31006547 ~ 31022524 (+)
G495132 NA other upstream 2460188 30732352 ~ 30732890 (+)
LOC110525816 LOC106585060 other downstream 264247 33447246 ~ 33465055 (+)
G499111 NA other downstream 953752 34151140 ~ 34151737 (+)
fancc fancc other downstream 6072571 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 6476624 39673964 ~ 39680031 (+)

Expression


Co-expression Network