G497944


Basic Information

Item Value
gene id G497944
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 33384624 ~ 33384857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU565721
gcttcatgaaatgggtttccatggcagagcagccgcatacaagcgtaagatcaccatgcgcaatgccaagcgttggctggagcagtggaaaagcgttctctggagtgatgaatcacgcttcacttcCTTGTcagtccaacagacaaatctgggtttggcggatggcaggagaacgctacctgcccgaatgcatagcgccaactgtaacgtttggtggaggaggtataatggtct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU565721 True 234 lncRNA 0.52 1 33384624 33384857

Neighbor

gene id symbol gene type direction distance location
LOC110525814 LOC106585056 coding upstream 17189 33352672 ~ 33367435 (+)
LOC110525811 rpl6 coding upstream 53027 33327503 ~ 33331597 (+)
LOC110525808 LOC106585052 coding upstream 58236 33321939 ~ 33326388 (+)
c6h22orf39 cssa24h22orf39 coding upstream 64271 33317578 ~ 33320353 (+)
LOC110525806 LOC106585051 coding upstream 67449 33313355 ~ 33317175 (+)
LOC110525815 LOC106585058 coding downstream 35556 33420413 ~ 33439671 (+)
LOC110525816 LOC106585060 coding downstream 62389 33447246 ~ 33465055 (+)
LOC110525817 LOC106585059 coding downstream 81135 33465992 ~ 33508271 (+)
LOC110525819 slc25a1 coding downstream 130393 33515250 ~ 33568701 (+)
LOC110525821 LOC106585065 coding downstream 215827 33600684 ~ 33691211 (+)
G497939 NA non-coding upstream 5458 33378906 ~ 33379166 (+)
G497933 NA non-coding upstream 15699 33368714 ~ 33368925 (+)
G497925 NA non-coding upstream 37255 33347075 ~ 33347369 (+)
G497921 LOC103397138 non-coding upstream 47889 33332650 ~ 33336735 (+)
G497855 NA non-coding upstream 174835 33208850 ~ 33209789 (+)
G497945 NA non-coding downstream 304 33385161 ~ 33385378 (+)
G497946 NA non-coding downstream 870 33385727 ~ 33386632 (+)
G497948 NA non-coding downstream 3322 33388179 ~ 33388419 (+)
G497958 NA non-coding downstream 16351 33401208 ~ 33401525 (+)
G498010 NA non-coding downstream 128373 33513230 ~ 33513454 (+)
LOC110525799 LOC106585046 other upstream 220363 33135282 ~ 33165186 (+)
polk polk other upstream 455773 32926258 ~ 32936958 (+)
G495920 LOC106584987 other upstream 2071887 31294946 ~ 31312737 (+)
si:ch211-225b11.4 LOC106584980 other upstream 2374020 31006547 ~ 31022524 (+)
G499111 NA other downstream 766283 34151140 ~ 34151737 (+)
fancc fancc other downstream 5885102 39269915 ~ 39312098 (+)
LOC110525927 smim15 other downstream 6289155 39673964 ~ 39680031 (+)
LOC110525928 LOC106585161 other downstream 6349927 39734703 ~ 39750180 (+)

Expression


Co-expression Network